RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.3■□□□□ 0.84
LAPTM4B-204ENST00000619747 GNEQ9Y223 722 aaKnown RBP20.3■□□□□ 0.84
LAPTM4B-204ENST00000619747 E5RJQ4 531 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 TJP3O95049 919 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 PDGFRBP09619 1106 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 MAN1A1P33908 653 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 FKBP1BP68106 108 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 MAP2K5Q13163 448 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 PTK6Q13882 451 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 ZNF410Q86VK4 478 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 C9orf72Q96LT7 481 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 CHCHD3Q9NX63 227 aaKnown RBP20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 C2CD2Q9Y426 696 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 A6NHS1 94 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 RECQL4O94761 1208 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 FAM163BP0C2L3 166 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 ITIH2P19823 946 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 GRM5P41594 1212 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 MFSD10Q14728 455 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 C15orf59Q2T9L4 293 aaPredicted RBP20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 TFDP3Q5H9I0 405 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 PPP1R26Q5T8A7 1209 aaPredicted RBP20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 GKAP1Q5VSY0 366 aaPredicted RBP20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 IZUMO3Q5VZ72 239 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 CPLX4Q7Z7G2 160 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 SLCO2A1Q92959 643 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 NT5C1AQ9BXI3 368 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 WHRNQ9P202 907 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 ITGA11Q9UKX5 1188 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 ATICP31939 592 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 YARSP54577 528 aaKnown RBP20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 ATP11AP98196 1134 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 SLMAPQ14BN4 828 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 SLC27A1Q6PCB7 646 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 OR6B3Q8NGW1 331 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 CALN1Q9BXU9 219 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 KDM4CQ9H3R0 1056 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 PIDD1Q9HB75 910 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 NME7Q9Y5B8 376 aa20.29■□□□□ 0.84
LAPTM4B-204ENST00000619747 hCG_1818297A0A087WSY0 165 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 SRRM3A6NNA2 597 aaPredicted RBP20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 LIASO43766 372 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 F2P00734 622 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 CDKN2BP42772 138 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 ROR2Q01974 943 aaKnown RBP20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 C1QTNF12Q5T7M4 302 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 CAPN12Q6ZSI9 719 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 OSBPL1AQ9BXW6 950 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 ZFATQ9P243 1243 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 NRCAMQ92823 1304 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 RRN3P2A6NIE6 340 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 UNCXA6NJT0 531 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 RGS16O15492 202 aaPredicted RBP20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 CST8O60676 142 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 NUDT17P0C025 328 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 ZNF865P0CJ78 1059 aaPredicted RBP20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 VDRP11473 427 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 HOXD8P13378 290 aaPredicted RBP20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 GBP1P32455 592 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 NRLP54845 237 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 EIF3BP55884 814 aaKnown RBP20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 PPP2R2AP63151 447 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 CNGA2Q16280 664 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 SCUBE3Q8IX30 993 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 SELENOSQ9BQE4 189 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 B3GNT5Q9BYG0 378 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 DPEP3Q9H4B8 488 aa20.28■□□□□ 0.84
LAPTM4B-204ENST00000619747 SGK1O00141 431 aa20.27■□□□□ 0.84
LAPTM4B-204ENST00000619747 MAP3K13O43283 966 aa20.27■□□□□ 0.84
LAPTM4B-204ENST00000619747 MIPP30301 263 aa20.27■□□□□ 0.84
LAPTM4B-204ENST00000619747 ARSEP51690 589 aa20.27■□□□□ 0.84
LAPTM4B-204ENST00000619747 GOLGA7BQ2TAP0 167 aa20.27■□□□□ 0.84
LAPTM4B-204ENST00000619747 MORN1Q5T089 497 aa20.27■□□□□ 0.84
LAPTM4B-204ENST00000619747 ZNF618Q5T7W0 954 aa20.27■□□□□ 0.84
LAPTM4B-204ENST00000619747 SPATA21Q7Z572 469 aa20.27■□□□□ 0.84
LAPTM4B-204ENST00000619747 ARFGAP2Q8N6H7 521 aa20.27■□□□□ 0.84
LAPTM4B-204ENST00000619747 TRAIPQ9BWF2 469 aa20.27■□□□□ 0.84
LAPTM4B-204ENST00000619747 MIS12Q9H081 205 aa20.27■□□□□ 0.84
LAPTM4B-204ENST00000619747 CYP3A43Q9HB55 503 aa20.27■□□□□ 0.84
LAPTM4B-204ENST00000619747 CACNG4Q9UBN1 327 aa20.27■□□□□ 0.84
LAPTM4B-204ENST00000619747 CTNNAL1Q9UBT7 734 aa20.27■□□□□ 0.84
LAPTM4B-204ENST00000619747 SLC12A6Q9UHW9 1150 aa20.27■□□□□ 0.84
LAPTM4B-204ENST00000619747 DPPA5A6NC42 116 aa20.27■□□□□ 0.83
LAPTM4B-204ENST00000619747 GOLGA8MH3BSY2 632 aa20.27■□□□□ 0.83
LAPTM4B-204ENST00000619747 DARSP14868 501 aaKnown RBP20.27■□□□□ 0.83
LAPTM4B-204ENST00000619747 SLC25A11Q02978 314 aaKnown RBP20.27■□□□□ 0.83
LAPTM4B-204ENST00000619747 GPS1Q13098 491 aa20.27■□□□□ 0.83
LAPTM4B-204ENST00000619747 HHATQ5VTY9 493 aa20.27■□□□□ 0.83
LAPTM4B-204ENST00000619747 CYP4F22Q6NT55 531 aa20.27■□□□□ 0.83
LAPTM4B-204ENST00000619747 PMF1Q6P1K2 205 aa20.27■□□□□ 0.83
LAPTM4B-204ENST00000619747 NOTUMQ6P988 496 aa20.27■□□□□ 0.83
LAPTM4B-204ENST00000619747 RHBDF2Q6PJF5 856 aa20.27■□□□□ 0.83
LAPTM4B-204ENST00000619747 HOOK3Q86VS8 718 aa20.27■□□□□ 0.83
LAPTM4B-204ENST00000619747 CCDC89Q8N998 374 aa20.27■□□□□ 0.83
LAPTM4B-204ENST00000619747 KCTD6Q8NC69 237 aa20.27■□□□□ 0.83
LAPTM4B-204ENST00000619747 PRCCQ92733 491 aaPredicted RBP20.27■□□□□ 0.83
LAPTM4B-204ENST00000619747 NEU2Q9Y3R4 380 aa20.27■□□□□ 0.83
LAPTM4B-204ENST00000619747 RASGRF2O14827 1237 aa20.26■□□□□ 0.83
LAPTM4B-204ENST00000619747 GHRP10912 638 aa20.26■□□□□ 0.83
LAPTM4B-204ENST00000619747 TAP1Q03518 808 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms