RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 FAM81BQ96LP2 452 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 GCNAQ96QF7 691 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 SLC22A12Q96S37 553 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 ZSWIM1Q9BR11 485 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 TUBGCP2Q9BSJ2 902 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 DNAI2Q9GZS0 605 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 NDST4Q9H3R1 872 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 KRT82Q9NSB4 513 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 FAM49BQ9NUQ9 324 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 ZNF638Q14966 1978 aaKnown RBP8.73□□□□□ -1.01
NEK3-209ENST00000618856 KCNJ18B7U540 433 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 CHADO15335 359 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 VDRP11473 427 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 TRIM21P19474 475 aaKnown RBP8.73□□□□□ -1.01
NEK3-209ENST00000618856 SLC9A1P19634 815 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 YWHAQP27348 245 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 RPL34P49207 117 aaKnown RBP8.73□□□□□ -1.01
NEK3-209ENST00000618856 TUBP50607 506 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 KIF11P52732 1056 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 MAP3K7CLP57077 242 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 SLC7A9P82251 487 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 ZXDBP98169 803 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 PFKPQ01813 784 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 TYRO3Q06418 890 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 KCNMA1Q12791 1236 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 LRMPQ12912 555 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 TAF10Q12962 218 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 KCNJ12Q14500 433 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 TAF12Q16514 161 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 MEA1Q16626 185 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 ZNF394Q53GI3 561 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 CWF19L1Q69YN2 538 aaKnown RBP8.73□□□□□ -1.01
NEK3-209ENST00000618856 SASS6Q6UVJ0 657 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 LCLAT1Q6UWP7 414 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 GBP6Q6ZN66 633 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 RRAGAQ7L523 313 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 GPRIN1Q7Z2K8 1008 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 TTC30AQ86WT1 665 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 FBXL6Q8N531 539 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 CELF5Q8N6W0 485 aaKnown RBP8.73□□□□□ -1.01
NEK3-209ENST00000618856 PDZD8Q8NEN9 1154 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 ST13P5Q8NFI4 369 aaPredicted RBP8.73□□□□□ -1.01
NEK3-209ENST00000618856 SCAMP5Q8TAC9 235 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 TFAP2BQ92481 460 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 HEXIM2Q96MH2 286 aaKnown RBP8.73□□□□□ -1.01
NEK3-209ENST00000618856 FAM83CQ9BQN1 747 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 MED10Q9BTT4 135 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 TRMT61BQ9BVS5 477 aaKnown RBP8.73□□□□□ -1.01
NEK3-209ENST00000618856 NAA15Q9BXJ9 866 aaKnown RBP8.73□□□□□ -1.01
NEK3-209ENST00000618856 RNF38Q9H0F5 515 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 KIF9Q9HAQ2 790 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 TDP1Q9NUW8 608 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 FANCLQ9NW38 375 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 TRPM5Q9NZQ8 1165 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 APEX2Q9UBZ4 518 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 LIMA1Q9UHB6 759 aaKnown RBP8.73□□□□□ -1.01
NEK3-209ENST00000618856 ARHGAP26Q9UNA1 814 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 MAGED2Q9UNF1 606 aaPredicted RBP8.73□□□□□ -1.01
NEK3-209ENST00000618856 SCML2Q9UQR0 700 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 CCL26Q9Y258 94 aa8.73□□□□□ -1.01
NEK3-209ENST00000618856 ARIH1Q9Y4X5 557 aaPredicted RBP8.73□□□□□ -1.01
NEK3-209ENST00000618856 KMT2EQ8IZD2 1858 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 MYO15AQ9UKN7 3530 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 C2orf78A6NCI8 922 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 BECN2A8MW95 431 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 PDGFBP01127 241 aaPredicted RBP8.72□□□□□ -1.01
NEK3-209ENST00000618856 CFHP08603 1231 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 GLULP15104 373 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 PTMSP20962 102 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 ADORA2BP29275 332 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 MTIF2P46199 727 aaKnown RBP8.72□□□□□ -1.01
NEK3-209ENST00000618856 PLA2G4AP47712 749 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 PGFP49763 221 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 PDE6CP51160 858 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 CLCN5P51795 746 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 NUBP1P53384 320 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 MYL5Q02045 173 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 PRKCQQ04759 706 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 USP4Q13107 963 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 STILQ15468 1287 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 ZNF77Q15935 545 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 CNGA2Q16280 664 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 TPD52L1Q16890 204 aaPredicted RBP8.72□□□□□ -1.01
NEK3-209ENST00000618856 EXOC3L4Q17RC7 722 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 ARHGAP29Q52LW3 1261 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 SLC44A4Q53GD3 710 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 SGO2Q562F6 1265 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 PM20D1Q6GTS8 502 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 KLHDC10Q6PID8 442 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 TMEM270Q6UE05 265 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 BHLHA9Q7RTU4 235 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 CCDC186Q7Z3E2 898 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 SCML4Q8N228 414 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 PPM1KQ8N3J5 372 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 MAB21L3Q8N8X9 362 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 BPIFB1Q8TDL5 484 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 SLC35F5Q8WV83 523 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 KCTD13Q8WZ19 329 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 SHC3Q92529 594 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 IRF7Q92985 503 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms