RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 FNIP1Q8TF40 1166 aa21.29■■□□□ 1
NEK3-208ENST00000618534 NIFKQ9BYG3 293 aaKnown RBP21.29■■□□□ 1
NEK3-208ENST00000618534 XYLT2Q9H1B5 865 aa21.29■■□□□ 1
NEK3-208ENST00000618534 ARMCX1Q9P291 453 aa21.29■■□□□ 1
NEK3-208ENST00000618534 TEX264Q9Y6I9 313 aa21.29■■□□□ 1
NEK3-208ENST00000618534 FAM237BA0A1B0GVD1 139 aa21.29■■□□□ 1
NEK3-208ENST00000618534 FCHO1O14526 889 aa21.29■■□□□ 1
NEK3-208ENST00000618534 AVILO75366 819 aa21.29■■□□□ 1
NEK3-208ENST00000618534 FAM155BO75949 473 aa21.29■■□□□ 1
NEK3-208ENST00000618534 ESRRAP11474 423 aaPredicted RBP21.29■■□□□ 1
NEK3-208ENST00000618534 MIPP30301 263 aa21.29■■□□□ 1
NEK3-208ENST00000618534 SERPINB4P48594 390 aa21.29■■□□□ 1
NEK3-208ENST00000618534 KLC1Q07866 573 aa21.29■■□□□ 1
NEK3-208ENST00000618534 FSTL1Q12841 308 aa21.29■■□□□ 1
NEK3-208ENST00000618534 ORC1Q13415 861 aa21.29■■□□□ 1
NEK3-208ENST00000618534 KRT72Q14CN4 511 aa21.29■■□□□ 1
NEK3-208ENST00000618534 CCDC62Q6P9F0 684 aa21.29■■□□□ 1
NEK3-208ENST00000618534 PRPF39Q86UA1 669 aaKnown RBP21.29■■□□□ 1
NEK3-208ENST00000618534 ZC3H18Q86VM9 953 aaKnown RBP21.29■■□□□ 1
NEK3-208ENST00000618534 XYLT1Q86Y38 959 aa21.29■■□□□ 1
NEK3-208ENST00000618534 OXNAD1Q96HP4 312 aaPredicted RBP21.29■■□□□ 1
NEK3-208ENST00000618534 SYT15Q9BQS2 421 aa21.29■■□□□ 1
NEK3-208ENST00000618534 NXF1Q9UBU9 619 aaKnown RBP21.29■■□□□ 1
NEK3-208ENST00000618534 SPDYE5A6NIY4 337 aa21.28■■□□□ 1
NEK3-208ENST00000618534 ENO4A6NNW6 628 aa21.28■■□□□ 1
NEK3-208ENST00000618534 CAPN9O14815 690 aa21.28■■□□□ 1
NEK3-208ENST00000618534 MSCO60682 206 aa21.28■■□□□ 1
NEK3-208ENST00000618534 TOM1L1O75674 476 aa21.28■■□□□ 1
NEK3-208ENST00000618534 ERBB2P04626 1255 aa21.28■■□□□ 1
NEK3-208ENST00000618534 BACE1P56817 501 aa21.28■■□□□ 1
NEK3-208ENST00000618534 CXCL9Q07325 125 aa21.28■■□□□ 1
NEK3-208ENST00000618534 MMRN1Q13201 1228 aa21.28■■□□□ 1
NEK3-208ENST00000618534 CDHR3Q6ZTQ4 885 aa21.28■■□□□ 1
NEK3-208ENST00000618534 NIM1KQ8IY84 436 aa21.28■■□□□ 1
NEK3-208ENST00000618534 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.28■■□□□ 1
NEK3-208ENST00000618534 CMASQ8NFW8 434 aaPredicted RBP21.28■■□□□ 1
NEK3-208ENST00000618534 ZNF483Q8TF39 744 aaPredicted RBP21.28■■□□□ 1
NEK3-208ENST00000618534 FAM136AQ96C01 138 aa21.28■■□□□ 1
NEK3-208ENST00000618534 SYNCQ9H7C4 482 aa21.28■■□□□ 1
NEK3-208ENST00000618534 PHIPQ8WWQ0 1821 aa21.28■■□□□ 1
NEK3-208ENST00000618534 PSMG1O95456 288 aa21.28■■□□□ 1
NEK3-208ENST00000618534 ROR1Q01973 937 aa21.28■■□□□ 1
NEK3-208ENST00000618534 DARS2Q6PI48 645 aaKnown RBP21.28■■□□□ 1
NEK3-208ENST00000618534 ALYREFQ86V81 257 aaKnown RBP21.28■■□□□ 1
NEK3-208ENST00000618534 TTLL6Q8N841 843 aa21.28■■□□□ 1
NEK3-208ENST00000618534 CFAP36Q96G28 342 aa21.28■■□□□ 1
NEK3-208ENST00000618534 MRPL4Q9BYD3 311 aaKnown RBP21.28■■□□□ 1
NEK3-208ENST00000618534 NMUR2Q9GZQ4 415 aa21.28■■□□□ 1
NEK3-208ENST00000618534 ARHGEF4Q9NR80 690 aa21.28■■□□□ 1
NEK3-208ENST00000618534 ABLIM1O14639 778 aa21.27■■□□□ 1
NEK3-208ENST00000618534 KCNJ11Q14654 390 aa21.27■■□□□ 1
NEK3-208ENST00000618534 TMEM154Q6P9G4 183 aa21.27■■□□□ 1
NEK3-208ENST00000618534 DTX3LQ8TDB6 740 aa21.27■■□□□ 1
NEK3-208ENST00000618534 PRPF31Q8WWY3 499 aaKnown RBP21.27■■□□□ 1
NEK3-208ENST00000618534 SRPK1Q96SB4 655 aaKnown RBP21.27■■□□□ 1
NEK3-208ENST00000618534 ACAD9Q9H845 621 aa21.27■■□□□ 1
NEK3-208ENST00000618534 SRCAPQ6ZRS2 3230 aa21.27■■□□□ 1
NEK3-208ENST00000618534 OGTO15294 1046 aa21.27■■□□□ 1
NEK3-208ENST00000618534 TBX10O75333 385 aa21.27■■□□□ 1
NEK3-208ENST00000618534 HOXC6P09630 235 aa21.27■■□□□ 1
NEK3-208ENST00000618534 RARBP10826 455 aa21.27■■□□□ 1
NEK3-208ENST00000618534 RFC5P40937 340 aa21.27■■□□□ 1
NEK3-208ENST00000618534 CPA2P48052 419 aa21.27■■□□□ 1
NEK3-208ENST00000618534 TARBP2Q15633 366 aaKnown RBP21.27■■□□□ 1
NEK3-208ENST00000618534 CFAP61Q8NHU2 1237 aa21.27■■□□□ 1
NEK3-208ENST00000618534 UCMAQ8WVF2 138 aa21.27■■□□□ 1
NEK3-208ENST00000618534 PCYT2Q99447 389 aa21.27■■□□□ 1
NEK3-208ENST00000618534 MECRQ9BV79 373 aa21.27■■□□□ 1
NEK3-208ENST00000618534 LHX5Q9H2C1 402 aa21.27■■□□□ 1
NEK3-208ENST00000618534 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.27■■□□□ 1
NEK3-208ENST00000618534 CPSF3Q9UKF6 684 aaKnown RBP21.27■■□□□ 1
NEK3-208ENST00000618534 LCTP09848 1927 aa21.26■□□□□ 0.99
NEK3-208ENST00000618534 TRIM49D1C9J1S8 452 aa21.26■□□□□ 0.99
NEK3-208ENST00000618534 COPEO14579 308 aa21.26■□□□□ 0.99
NEK3-208ENST00000618534 TRUB2O95900 331 aaKnown RBP21.26■□□□□ 0.99
NEK3-208ENST00000618534 OAZ1P54368 228 aa21.26■□□□□ 0.99
NEK3-208ENST00000618534 HMGCS2P54868 508 aa21.26■□□□□ 0.99
NEK3-208ENST00000618534 SLC34A1Q06495 639 aa21.26■□□□□ 0.99
NEK3-208ENST00000618534 LRRC74BQ6ZQY2 392 aa21.26■□□□□ 0.99
NEK3-208ENST00000618534 SCG3Q8WXD2 468 aaKnown RBP21.26■□□□□ 0.99
NEK3-208ENST00000618534 PEBP4Q96S96 227 aa21.26■□□□□ 0.99
NEK3-208ENST00000618534 ACO2Q99798 780 aaKnown RBP21.26■□□□□ 0.99
NEK3-208ENST00000618534 USP18Q9UMW8 372 aa21.26■□□□□ 0.99
NEK3-208ENST00000618534 EME2A4GXA9 379 aaPredicted RBP21.26■□□□□ 0.99
NEK3-208ENST00000618534 MAP3K13O43283 966 aa21.26■□□□□ 0.99
NEK3-208ENST00000618534 IL1BP01584 269 aa21.26■□□□□ 0.99
NEK3-208ENST00000618534 CDH8P55286 799 aa21.26■□□□□ 0.99
NEK3-208ENST00000618534 MXRA7P84157 204 aa21.26■□□□□ 0.99
NEK3-208ENST00000618534 NOMO1Q15155 1222 aa21.26■□□□□ 0.99
NEK3-208ENST00000618534 PPM1NQ8N819 430 aa21.26■□□□□ 0.99
NEK3-208ENST00000618534 FAF2Q96CS3 445 aa21.26■□□□□ 0.99
NEK3-208ENST00000618534 IQCGQ9H095 443 aaKnown RBP21.26■□□□□ 0.99
NEK3-208ENST00000618534 MMADHCQ9H3L0 296 aaPredicted RBP21.26■□□□□ 0.99
NEK3-208ENST00000618534 TTLL3Q9Y4R7 772 aa21.26■□□□□ 0.99
NEK3-208ENST00000618534 MED7O43513 233 aa21.25■□□□□ 0.99
NEK3-208ENST00000618534 GCLCP48506 637 aaPredicted RBP21.25■□□□□ 0.99
NEK3-208ENST00000618534 OSTNP61366 133 aa21.25■□□□□ 0.99
NEK3-208ENST00000618534 LBRQ14739 615 aaKnown RBP21.25■□□□□ 0.99
NEK3-208ENST00000618534 SLC26A11Q86WA9 606 aa21.25■□□□□ 0.99
NEK3-208ENST00000618534 CTAGE3PQ8IX95 158 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms