RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 STRN3Q13033 797 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 MAPRE1Q15691 268 aaKnown RBP4.92□□□□□ -1.62
SNCA-213ENST00000618500 PLEKHG6Q3KR16 790 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 MGAT5BQ3V5L5 792 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 C6orf118Q5T5N4 469 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 EMC10Q5UCC4 262 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 PIK3AP1Q6ZUJ8 805 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 C1orf186Q6ZWK4 172 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 DPH6Q7L8W6 267 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 ADGRG2Q8IZP9 1017 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 ALLCQ8N6M5 410 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 MAB21L3Q8N8X9 362 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 CEP120Q8N960 986 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 ATAD1Q8NBU5 361 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 RBBP8NLQ8NC74 664 aaPredicted RBP4.92□□□□□ -1.62
SNCA-213ENST00000618500 PIGOQ8TEQ8 1089 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 C8orf48Q96LL4 319 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 ZNF578Q96N58 590 aaPredicted RBP4.92□□□□□ -1.62
SNCA-213ENST00000618500 FCRL3Q96P31 734 aaPredicted RBP4.92□□□□□ -1.62
SNCA-213ENST00000618500 IRX2Q9BZI1 471 aaPredicted RBP4.92□□□□□ -1.62
SNCA-213ENST00000618500 KMT5AQ9NQR1 393 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 WSB2Q9NYS7 404 aaPredicted RBP4.92□□□□□ -1.62
SNCA-213ENST00000618500 IL37Q9NZH6 218 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 CALCOCO1Q9P1Z2 691 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 FBXO10Q9UK96 956 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 ODF2LQ9ULJ1 636 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 SLC27A5Q9Y2P5 690 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 SCN1AP35498 2009 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 CFAP47Q6ZTR5 3102 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 A0A0B4J269 797 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 CYSRT1A8MQ03 144 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 METTL12A8MUP2 240 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 TERTO14746 1132 aaKnown RBP4.92□□□□□ -1.62
SNCA-213ENST00000618500 TLX3O43711 291 aaPredicted RBP4.92□□□□□ -1.62
SNCA-213ENST00000618500 CACNG3O60359 315 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 OR4Q2P0C623 313 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 OR52Z1P0C646 297 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 CCT8P50990 548 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 ENOX2Q16206 610 aaKnown RBP4.92□□□□□ -1.62
SNCA-213ENST00000618500 KANSL1Q7Z3B3 1105 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 EFCAB13Q8IY85 973 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 OXR1Q8N573 874 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 IGSF22Q8N9C0 903 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 TRIML1Q8N9V2 468 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 TMEM176AQ96HP8 235 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 JAKMIP1Q96N16 626 aaKnown RBP4.92□□□□□ -1.62
SNCA-213ENST00000618500 SEPT5Q99719 369 aaPredicted RBP4.92□□□□□ -1.62
SNCA-213ENST00000618500 SEMA3CQ99985 751 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 GTPBP2Q9BX10 602 aaKnown RBP4.92□□□□□ -1.62
SNCA-213ENST00000618500 SMG9Q9H0W8 520 aaKnown RBP4.92□□□□□ -1.62
SNCA-213ENST00000618500 SLC27A6Q9Y2P4 619 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 WNT6Q9Y6F9 365 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 IGSF10Q6WRI0 2623 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 FAM92AA1XBS5 289 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 LACTBL1A8MY62 500 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 CILPO75339 1184 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 RFPL3O75679 317 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 LHX1P48742 406 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 ZNF131P52739 623 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 ERVPABLB-1P60509 514 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 TLE3Q04726 772 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 SAFBQ15424 915 aaKnown RBP eCLIP4.91□□□□□ -1.62
SNCA-213ENST00000618500 TEAD4Q15561 434 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 BROXQ5VW32 411 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 TXNDC8Q6A555 127 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 C4orf50Q6ZRC1 276 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 DCBLD1Q8N8Z6 715 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 TERB1Q8NA31 727 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 HIC2Q96JB3 615 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 CAMK1GQ96NX5 476 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 PGLYRP2Q96PD5 576 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 TARS2Q9BW92 718 aaKnown RBP4.91□□□□□ -1.62
SNCA-213ENST00000618500 HAPLN2Q9GZV7 340 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 ERVMER34-1Q9H9K5 563 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 USP29Q9HBJ7 922 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 TM7SF3Q9NS93 570 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 BCCIPQ9P287 314 aaKnown RBP eCLIP4.91□□□□□ -1.62
SNCA-213ENST00000618500 HCN2Q9UL51 889 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 NBEAQ8NFP9 2946 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 ATXN2Q99700 1313 aaKnown RBP4.91□□□□□ -1.62
SNCA-213ENST00000618500 CHD8Q9HCK8 2581 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 HIP1RO75146 1068 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 ZIC2O95409 532 aaPredicted RBP4.91□□□□□ -1.62
SNCA-213ENST00000618500 CXCL8P10145 99 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 NDUFV2P19404 249 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 MYL7Q01449 175 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 ZBTB16Q05516 673 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 TMEM132DQ14C87 1099 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 TAF12Q16514 161 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 EARS2Q5JPH6 523 aaKnown RBP4.91□□□□□ -1.62
SNCA-213ENST00000618500 NAIF1Q69YI7 327 aaPredicted RBP4.91□□□□□ -1.62
SNCA-213ENST00000618500 LRRTM3Q86VH5 581 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 ERICH1Q86X53 443 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 ZFRQ96KR1 1074 aaKnown RBP4.91□□□□□ -1.62
SNCA-213ENST00000618500 HSPA12BQ96MM6 686 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 SRRTQ9BXP5 876 aaKnown RBP4.91□□□□□ -1.62
SNCA-213ENST00000618500 RPF1Q9H9Y2 349 aaKnown RBP4.91□□□□□ -1.62
SNCA-213ENST00000618500 CYB561D2O14569 222 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 CPLX1O14810 134 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 CLDN3O15551 220 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms