RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 LAMTOR5O43504 91 aa16.96■□□□□ 0.31
BRCA1-228ENST00000618469 CILPO75339 1184 aa16.96■□□□□ 0.31
BRCA1-228ENST00000618469 AP1G2O75843 785 aa16.96■□□□□ 0.31
BRCA1-228ENST00000618469 ADORA2BP29275 332 aa16.96■□□□□ 0.31
BRCA1-228ENST00000618469 STARD6P59095 220 aa16.96■□□□□ 0.31
BRCA1-228ENST00000618469 SLC44A4Q53GD3 710 aa16.96■□□□□ 0.31
BRCA1-228ENST00000618469 TPRG1Q6ZUI0 275 aa16.96■□□□□ 0.31
BRCA1-228ENST00000618469 PAQR9Q6ZVX9 377 aa16.96■□□□□ 0.31
BRCA1-228ENST00000618469 C12orf29Q8N999 325 aa16.96■□□□□ 0.31
BRCA1-228ENST00000618469 IRF7Q92985 503 aa16.96■□□□□ 0.31
BRCA1-228ENST00000618469 TTLL2Q9BWV7 592 aa16.96■□□□□ 0.31
BRCA1-228ENST00000618469 SRRTQ9BXP5 876 aaKnown RBP16.96■□□□□ 0.31
BRCA1-228ENST00000618469 USP18Q9UMW8 372 aa16.96■□□□□ 0.31
BRCA1-228ENST00000618469 COQ4Q9Y3A0 265 aa16.96■□□□□ 0.31
BRCA1-228ENST00000618469 KANSL1LA0AUZ9 987 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 FAM170BA6NMN3 283 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 GOLGA6L22H0YM25 854 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 GNA14O95837 355 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 CKMP06732 381 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 WEE1P30291 646 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 PRKCQQ04759 706 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 FCHO2Q0JRZ9 810 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 LPAL2Q16609 132 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 ZNF394Q53GI3 561 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 MON1AQ86VX9 555 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 CRYBG2Q8N1P7 616 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 BPIFB1Q8TDL5 484 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 WHAMMQ8TF30 809 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 ATRIPQ8WXE1 791 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 TATDN2Q93075 761 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 SHDQ96IW2 340 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 KCNK16Q96T55 309 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 DNAI2Q9GZS0 605 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 CISHQ9NSE2 258 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 OBP2AQ9NY56 170 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 RWDD2AQ9UIY3 292 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 RALYQ9UKM9 306 aaKnown RBP16.95■□□□□ 0.3
BRCA1-228ENST00000618469 CCL26Q9Y258 94 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 ACACBO00763 2458 aa16.95■□□□□ 0.3
BRCA1-228ENST00000618469 MAP1BP46821 2468 aaKnown RBP16.94■□□□□ 0.3
BRCA1-228ENST00000618469 TRAV19A0A0A6YYK7 116 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 C2orf78A6NCI8 922 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 FAM200BP0CF97 657 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 SLC5A3P53794 718 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 LRMPQ12912 555 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 DPCR1Q3MIW9 517 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 TRIM59Q8IWR1 403 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 NUP93Q8N1F7 819 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 TTC39CQ8N584 583 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 CELF5Q8N6W0 485 aaKnown RBP16.94■□□□□ 0.3
BRCA1-228ENST00000618469 MLKLQ8NB16 471 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 USP13Q92995 863 aaPredicted RBP16.94■□□□□ 0.3
BRCA1-228ENST00000618469 FAXDC2Q96IV6 333 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 ZFYVE19Q96K21 471 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 LRRC3BQ96PB8 259 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 SLITRK1Q96PX8 696 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 SLC22A12Q96S37 553 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 SMOQ99835 787 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 KIF9Q9HAQ2 790 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 TRPM5Q9NZQ8 1165 aa16.94■□□□□ 0.3
BRCA1-228ENST00000618469 CDV3Q9UKY7 258 aaKnown RBP16.94■□□□□ 0.3
BRCA1-228ENST00000618469 SMG5Q9UPR3 1016 aaKnown RBP16.94■□□□□ 0.3
BRCA1-228ENST00000618469 SOBPA7XYQ1 873 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 ARNTLO00327 626 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 CHADO15335 359 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 RTN3O95197 1032 aaPredicted RBP16.93■□□□□ 0.3
BRCA1-228ENST00000618469 FGFR1OPO95684 399 aaKnown RBP16.93■□□□□ 0.3
BRCA1-228ENST00000618469 CCDC192P0DO97 292 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 MARSP56192 900 aaKnown RBP16.93■□□□□ 0.3
BRCA1-228ENST00000618469 MAP3K7CLP57077 242 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 TAF10Q12962 218 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 CUL2Q13617 745 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 ARHGAP29Q52LW3 1261 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 TTC16Q8NEE8 873 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 ZMIZ2Q8NF64 920 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 GPT2Q8TD30 523 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 CSGALNACT1Q8TDX6 532 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 FBXO32Q969P5 355 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 JAKMIP2Q96AA8 810 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 CYFIP2Q96F07 1278 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 CNOT6LQ96LI5 555 aaKnown RBP16.93■□□□□ 0.3
BRCA1-228ENST00000618469 HNRNPABQ99729 332 aaKnown RBP16.93■□□□□ 0.3
BRCA1-228ENST00000618469 PARD6AQ9NPB6 346 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 TDP1Q9NUW8 608 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.93■□□□□ 0.3
BRCA1-228ENST00000618469 PIAS3Q9Y6X2 628 aa16.93■□□□□ 0.3
BRCA1-228ENST00000618469 CACNA1GO43497 2377 aa16.92■□□□□ 0.3
BRCA1-228ENST00000618469 BEST1O76090 585 aa16.92■□□□□ 0.3
BRCA1-228ENST00000618469 ABL1P00519 1130 aa16.92■□□□□ 0.3
BRCA1-228ENST00000618469 AFPP02771 609 aaKnown RBP16.92■□□□□ 0.3
BRCA1-228ENST00000618469 USP17L7P0C7H9 530 aa16.92■□□□□ 0.3
BRCA1-228ENST00000618469 YWHAQP27348 245 aa16.92■□□□□ 0.3
BRCA1-228ENST00000618469 CETN1Q12798 172 aa16.92■□□□□ 0.3
BRCA1-228ENST00000618469 ZNF268Q14587 947 aaPredicted RBP16.92■□□□□ 0.3
BRCA1-228ENST00000618469 ST3GAL2Q16842 350 aa16.92■□□□□ 0.3
BRCA1-228ENST00000618469 CLEC20AQ6ZU45 233 aa16.92■□□□□ 0.3
BRCA1-228ENST00000618469 CREBRFQ8IUR6 639 aa16.92■□□□□ 0.3
BRCA1-228ENST00000618469 ARL14EPQ8N8R7 260 aaPredicted RBP16.92■□□□□ 0.3
BRCA1-228ENST00000618469 SCAMP5Q8TAC9 235 aa16.92■□□□□ 0.3
BRCA1-228ENST00000618469 RIN3Q8TB24 985 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms