RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.57■■□□□ 1.04
SDHA-220ENST00000617470 NLRC5Q86WI3 1866 aa21.57■■□□□ 1.04
SDHA-220ENST00000617470 ESYT3A0FGR9 886 aa21.57■■□□□ 1.04
SDHA-220ENST00000617470 O00370 1275 aa21.57■■□□□ 1.04
SDHA-220ENST00000617470 SYN3O14994 580 aa21.57■■□□□ 1.04
SDHA-220ENST00000617470 SOD2P04179 222 aa21.57■■□□□ 1.04
SDHA-220ENST00000617470 PDGFRBP09619 1106 aa21.57■■□□□ 1.04
SDHA-220ENST00000617470 GNL1P36915 607 aaPredicted RBP21.57■■□□□ 1.04
SDHA-220ENST00000617470 PLCB3Q01970 1234 aa21.57■■□□□ 1.04
SDHA-220ENST00000617470 GUCY2DQ02846 1103 aa21.57■■□□□ 1.04
SDHA-220ENST00000617470 YWHAHQ04917 246 aaPredicted RBP21.57■■□□□ 1.04
SDHA-220ENST00000617470 ZNF252P-AS1Q0IIN9 211 aa21.57■■□□□ 1.04
SDHA-220ENST00000617470 KCTD19Q17RG1 926 aaPredicted RBP21.57■■□□□ 1.04
SDHA-220ENST00000617470 CYP4A22Q5TCH4 519 aa21.57■■□□□ 1.04
SDHA-220ENST00000617470 HDXQ7Z353 690 aa21.57■■□□□ 1.04
SDHA-220ENST00000617470 TMEM86AQ8N2M4 240 aa21.57■■□□□ 1.04
SDHA-220ENST00000617470 EPB41L5Q9HCM4 733 aa21.57■■□□□ 1.04
SDHA-220ENST00000617470 TCRBV7S2A1N4TA0A589 114 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 A8MXQ7 604 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 MICAL2O94851 1124 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 TYMPP19971 482 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 FGFR3P22607 806 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 RWDD2BP57060 319 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 CASP8Q14790 479 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 RTP2Q5QGT7 225 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 CASKIN2Q8WXE0 1202 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 NAP1L3Q99457 506 aaPredicted RBP21.56■■□□□ 1.04
SDHA-220ENST00000617470 UBXN6Q9BZV1 441 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 DDX43Q9NXZ2 648 aaKnown RBP21.56■■□□□ 1.04
SDHA-220ENST00000617470 AMACRQ9UHK6 382 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 C5orf67F2Z3F1 127 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 HCRTO43612 131 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 CYP11A1P05108 521 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 RB1P06400 928 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 VDRP11473 427 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 CARSP49589 748 aaKnown RBP21.56■■□□□ 1.04
SDHA-220ENST00000617470 TAS2R40P59535 323 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 OGDHQ02218 1023 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 CNGA2Q16280 664 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 MAP9Q49MG5 647 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 VARS2Q5ST30 1063 aaKnown RBP21.56■■□□□ 1.04
SDHA-220ENST00000617470 LIMS2Q7Z4I7 341 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 OSTM1Q86WC4 334 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 RIN2Q8WYP3 895 aaPredicted RBP21.56■■□□□ 1.04
SDHA-220ENST00000617470 GDAP1L1Q96MZ0 367 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 SLITRK6Q9H5Y7 841 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 CEP83Q9Y592 693 aa21.56■■□□□ 1.04
SDHA-220ENST00000617470 WARSP23381 471 aaKnown RBP21.55■■□□□ 1.04
SDHA-220ENST00000617470 ACAT1P24752 427 aaKnown RBP21.55■■□□□ 1.04
SDHA-220ENST00000617470 LMO2P25791 158 aa21.55■■□□□ 1.04
SDHA-220ENST00000617470 LHX1P48742 406 aa21.55■■□□□ 1.04
SDHA-220ENST00000617470 CBX1P83916 185 aa21.55■■□□□ 1.04
SDHA-220ENST00000617470 SIX1Q15475 284 aaPredicted RBP21.55■■□□□ 1.04
SDHA-220ENST00000617470 LRIT3Q3SXY7 679 aa21.55■■□□□ 1.04
SDHA-220ENST00000617470 IFT20Q8IY31 132 aa21.55■■□□□ 1.04
SDHA-220ENST00000617470 THEM5Q8N1Q8 247 aa21.55■■□□□ 1.04
SDHA-220ENST00000617470 PRELID2Q8N945 189 aa21.55■■□□□ 1.04
SDHA-220ENST00000617470 HEXIM2Q96MH2 286 aaKnown RBP21.55■■□□□ 1.04
SDHA-220ENST00000617470 CPXM1Q96SM3 734 aa21.55■■□□□ 1.04
SDHA-220ENST00000617470 HERC2P3Q9BVR0 1158 aa21.55■■□□□ 1.04
SDHA-220ENST00000617470 EFEMP2O95967 443 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 URODP06132 367 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 MAN1A1P33908 653 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 GPD2P43304 727 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 GLUD2P49448 558 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 GPM6BQ13491 265 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 DNAJC24Q6P3W2 148 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 PRSS55Q6UWB4 352 aaPredicted RBP21.54■■□□□ 1.04
SDHA-220ENST00000617470 TMC7Q7Z402 723 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 SLC13A5Q86YT5 568 aaPredicted RBP21.54■■□□□ 1.04
SDHA-220ENST00000617470 KRT222Q8N1A0 295 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 TTC39CQ8N584 583 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 C3orf20Q8ND61 904 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 POF1BQ8WVV4 589 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 AUTS2Q8WXX7 1259 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 CLUL1Q15846 466 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 CTXN3Q4LDR2 81 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 SEL1L2Q5TEA6 688 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 RNF168Q8IYW5 571 aaPredicted RBP21.54■■□□□ 1.04
SDHA-220ENST00000617470 C12orf29Q8N999 325 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 SPPL3Q8TCT6 385 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 MCEEQ96PE7 176 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 NT5C1AQ9BXI3 368 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 ENTPD7Q9NQZ7 604 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 STK39Q9UEW8 545 aa21.54■■□□□ 1.04
SDHA-220ENST00000617470 GABRDO14764 452 aa21.53■■□□□ 1.04
SDHA-220ENST00000617470 GRM6O15303 877 aa21.53■■□□□ 1.04
SDHA-220ENST00000617470 ERBB2P04626 1255 aa21.53■■□□□ 1.04
SDHA-220ENST00000617470 SGO2Q562F6 1265 aa21.53■■□□□ 1.04
SDHA-220ENST00000617470 ZNF280DQ6N043 979 aa21.53■■□□□ 1.04
SDHA-220ENST00000617470 ANKS3Q6ZW76 656 aa21.53■■□□□ 1.04
SDHA-220ENST00000617470 MICAL1Q8TDZ2 1067 aa21.53■■□□□ 1.04
SDHA-220ENST00000617470 HERPUD2Q9BSE4 406 aa21.53■■□□□ 1.04
SDHA-220ENST00000617470 CHST7Q9NS84 486 aa21.53■■□□□ 1.04
SDHA-220ENST00000617470 IP6K2Q9UHH9 426 aa21.53■■□□□ 1.04
SDHA-220ENST00000617470 CHD9Q3L8U1 2897 aa21.52■■□□□ 1.04
SDHA-220ENST00000617470 M0QYV0 167 aa21.52■■□□□ 1.04
SDHA-220ENST00000617470 TTI1O43156 1089 aa21.52■■□□□ 1.04
SDHA-220ENST00000617470 FAM163BP0C2L3 166 aa21.52■■□□□ 1.04
SDHA-220ENST00000617470 TCF4P15884 667 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms