RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 KRT4P19013 534 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 NSUN2Q08J23 767 aaKnown RBP eCLIP15.28■□□□□ 0.04
SNPH-203ENST00000614659 PGM2Q96G03 612 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 DCLK3Q9C098 648 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.28■□□□□ 0.04
SNPH-203ENST00000614659 WARS2Q9UGM6 360 aaKnown RBP15.28■□□□□ 0.04
SNPH-203ENST00000614659 NQO1P15559 274 aaKnown RBP15.27■□□□□ 0.04
SNPH-203ENST00000614659 TGM2P21980 687 aa15.27■□□□□ 0.04
SNPH-203ENST00000614659 MAP2K5Q13163 448 aa15.27■□□□□ 0.04
SNPH-203ENST00000614659 CYB5D1Q6P9G0 228 aa15.27■□□□□ 0.04
SNPH-203ENST00000614659 OSGEPQ9NPF4 335 aa15.27■□□□□ 0.04
SNPH-203ENST00000614659 ARHGEF38Q9NXL2 777 aa15.27■□□□□ 0.04
SNPH-203ENST00000614659 FAM50BQ9Y247 325 aa15.27■□□□□ 0.04
SNPH-203ENST00000614659 PRG3Q9Y2Y8 225 aaPredicted RBP15.27■□□□□ 0.04
SNPH-203ENST00000614659 SNX5Q9Y5X3 404 aa15.27■□□□□ 0.04
SNPH-203ENST00000614659 PQBP1O60828 265 aaKnown RBP15.27■□□□□ 0.04
SNPH-203ENST00000614659 KLC1Q07866 573 aa15.27■□□□□ 0.04
SNPH-203ENST00000614659 IKBKEQ14164 716 aa15.27■□□□□ 0.04
SNPH-203ENST00000614659 IMPG1Q17R60 797 aa15.27■□□□□ 0.04
SNPH-203ENST00000614659 MIIPQ5JXC2 388 aa15.27■□□□□ 0.04
SNPH-203ENST00000614659 SEZ6LQ9BYH1 1024 aa15.27■□□□□ 0.04
SNPH-203ENST00000614659 INTS13Q9NVM9 706 aa15.27■□□□□ 0.04
SNPH-203ENST00000614659 CAND2O75155 1236 aa15.27■□□□□ 0.03
SNPH-203ENST00000614659 ITGB3P05106 788 aa15.27■□□□□ 0.03
SNPH-203ENST00000614659 RARRES1P49788 294 aa15.27■□□□□ 0.03
SNPH-203ENST00000614659 MRPS35P82673 323 aaKnown RBP15.27■□□□□ 0.03
SNPH-203ENST00000614659 TAS1R2Q8TE23 839 aa15.27■□□□□ 0.03
SNPH-203ENST00000614659 SLC20A1Q8WUM9 679 aa15.27■□□□□ 0.03
SNPH-203ENST00000614659 CNPY3Q9BT09 278 aa15.27■□□□□ 0.03
SNPH-203ENST00000614659 MRPL1Q9BYD6 325 aaKnown RBP15.27■□□□□ 0.03
SNPH-203ENST00000614659 ZC4H2Q9NQZ6 224 aa15.27■□□□□ 0.03
SNPH-203ENST00000614659 FAM86B1E9PN63 330 aa15.27■□□□□ 0.03
SNPH-203ENST00000614659 RIPK2O43353 540 aa15.27■□□□□ 0.03
SNPH-203ENST00000614659 FAM86B2P0C5J1 330 aa15.27■□□□□ 0.03
SNPH-203ENST00000614659 PSMC6P62333 389 aa15.27■□□□□ 0.03
SNPH-203ENST00000614659 TMTC4Q5T4D3 741 aa15.27■□□□□ 0.03
SNPH-203ENST00000614659 MAP4K3Q8IVH8 894 aa15.27■□□□□ 0.03
SNPH-203ENST00000614659 FBXO25Q8TCJ0 367 aa15.27■□□□□ 0.03
SNPH-203ENST00000614659 PTPRN2Q92932 1015 aa15.27■□□□□ 0.03
SNPH-203ENST00000614659 ULK4Q96C45 1275 aa15.27■□□□□ 0.03
SNPH-203ENST00000614659 FAR2Q96K12 515 aa15.27■□□□□ 0.03
SNPH-203ENST00000614659 ANXA9O76027 345 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 PBX1P40424 430 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 SCTRP47872 440 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 PTK6Q13882 451 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 USP10Q14694 798 aaKnown RBP15.26■□□□□ 0.03
SNPH-203ENST00000614659 HYIQ5T013 277 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 SLC30A9Q6PML9 568 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 LRRC55Q6ZSA7 311 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 NT5DC4Q86YG4 428 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 OR6P1Q8NGX9 317 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 ING2Q9H160 280 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 GPRC5CQ9NQ84 441 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 DDX3XO00571 662 aaKnown RBP eCLIP15.26■□□□□ 0.03
SNPH-203ENST00000614659 XYLBO75191 536 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 HSPA13P48723 471 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 ACAP1Q15027 740 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 SLC47A2Q86VL8 602 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 LRRC6Q86X45 466 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 SLC9A9Q8IVB4 645 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 MDM1Q8TC05 714 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 CENPTQ96BT3 561 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 TINF2Q9BSI4 451 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 THG1LQ9NWX6 298 aaKnown RBP15.26■□□□□ 0.03
SNPH-203ENST00000614659 TRPC5OSA6NMA1 111 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 HNRNPCP07910 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
SNPH-203ENST00000614659 BMT2Q1RMZ1 405 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 ZPBP2Q6X784 338 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 SV2AQ7L0J3 742 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 ZDHHC17Q8IUH5 632 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 DNAJC9Q8WXX5 260 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 TBCBQ99426 244 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 NOD2Q9HC29 1040 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 GGA2Q9UJY4 613 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 SPEF2Q9C093 1822 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 FAM208AQ9UK61 1670 aaKnown RBP15.26■□□□□ 0.03
SNPH-203ENST00000614659 EIF4E1BA6NMX2 242 aaKnown RBP15.26■□□□□ 0.03
SNPH-203ENST00000614659 FBXO21O94952 628 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 ACADSP16219 412 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 BMP6P22004 513 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 RRM1P23921 792 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 MARSP56192 900 aaKnown RBP15.26■□□□□ 0.03
SNPH-203ENST00000614659 HDAC4P56524 1084 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 KDSRQ06136 332 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 NCLNQ969V3 563 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 FOPNLQ96NB1 174 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 CYP4F11Q9HBI6 524 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 ALG13Q9NP73 1137 aaKnown RBP15.26■□□□□ 0.03
SNPH-203ENST00000614659 ITGA11Q9UKX5 1188 aa15.26■□□□□ 0.03
SNPH-203ENST00000614659 TMEM247A6NEH6 219 aa15.25■□□□□ 0.03
SNPH-203ENST00000614659 VCPP55072 806 aaKnown RBP15.25■□□□□ 0.03
SNPH-203ENST00000614659 KBTBD12Q3ZCT8 623 aa15.25■□□□□ 0.03
SNPH-203ENST00000614659 EPC2Q52LR7 807 aa15.25■□□□□ 0.03
SNPH-203ENST00000614659 TNFRSF25Q93038 417 aa15.25■□□□□ 0.03
SNPH-203ENST00000614659 TRPM5Q9NZQ8 1165 aa15.25■□□□□ 0.03
SNPH-203ENST00000614659 TRIM49D1C9J1S8 452 aa15.25■□□□□ 0.03
SNPH-203ENST00000614659 ZBTB22O15209 634 aa15.25■□□□□ 0.03
SNPH-203ENST00000614659 F9P00740 461 aa15.25■□□□□ 0.03
SNPH-203ENST00000614659 VHLP40337 213 aa15.25■□□□□ 0.03
SNPH-203ENST00000614659 PCYOX1LQ8NBM8 494 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms