RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 TPH2Q8IWU9 490 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ASCC1Q8N9N2 400 aaKnown RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 PNPT1Q8TCS8 783 aaKnown RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 RFFLQ8WZ73 363 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 TRIM62Q9BVG3 475 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 TMEM168Q9H0V1 697 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 UBR1Q8IWV7 1749 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 CHL1O00533 1208 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 MAPRE1Q15691 268 aaKnown RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 CCDC85BQ15834 202 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 CABP7Q86V35 215 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 TTC8Q8TAM2 541 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 KBTBD7Q8WVZ9 684 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ZC3H10Q96K80 434 aaKnown RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 MNTQ99583 582 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 THAP1Q9NVV9 213 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 PHF11Q9UIL8 331 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 VWDEQ8N2E2 1590 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ARHGEF33A8MVX0 844 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 LOC110117498-PIK3R3F6TDL0 507 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF862O60290 1169 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 FGFR2P21802 821 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 UBE3AQ05086 875 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 BORAQ6PGQ7 559 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ULK2Q8IYT8 1036 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ANKRD53Q8N9V6 530 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 DEPDC1BQ8WUY9 529 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 PIK3R3Q92569 461 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 E2F7Q96AV8 911 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 CPSF3Q9UKF6 684 aaKnown RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF142P52746 1687 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 FAM47E-STBD1D6RA91 191 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 TIMM44O43615 452 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 PRKD3O94806 890 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 YES1P07947 543 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ITGALP20701 1170 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 PTGDRQ13258 359 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ACVR2BQ13705 512 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 SMYD4Q8IYR2 804 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 REXO1Q8N1G1 1221 aaKnown RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 PSMA8Q8TAA3 256 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF75CPQ92670 426 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 GLG1Q92896 1179 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 CAB39LQ9H9S4 337 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 LAMB1P07942 1786 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 TRIM49BA6NDI0 452 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 TRIM49D1C9J1S8 452 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 GSTT2P0CG29 244 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 GSTT2BP0CG30 244 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 RFX1P22670 979 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 YAP1P46937 504 aaKnown RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 HSPA2P54652 639 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 MSLNQ13421 630 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ITPRIPL1Q6GPH6 555 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 STRA8Q7Z7C7 330 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 YTHDF1Q9BYJ9 559 aaKnown RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 KIDINS220Q9ULH0 1771 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 POTEMA6NI47 508 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ZBTB5O15062 677 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 FOSP01100 380 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 TRIP4Q15650 581 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 POTEHQ6S545 545 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 POTEGQ6S5H5 508 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 TTC7BQ86TV6 843 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 GCNAQ96QF7 691 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 TMEM120AQ9BXJ8 343 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ALG13Q9NP73 1137 aaKnown RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 CYP26B1Q9NR63 512 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 USE1Q9NZ43 259 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ZHX2Q9Y6X8 837 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ARHGEF35A5YM69 484 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 CCNB1P14635 433 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 MAGEA4P43358 317 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 TNFAIP8L3Q5GJ75 292 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 KCNT1Q5JUK3 1230 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 EMC10Q5UCC4 262 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 MFSD5Q6N075 450 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 JDP2Q8WYK2 163 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 STAMQ92783 540 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 VPS35Q96QK1 796 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 HERC2P3Q9BVR0 1158 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 OSBPL7Q9BZF2 842 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 VPS11Q9H270 941 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 MAPRE3Q9UPY8 281 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 CRABP2P29373 138 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 NEDD8Q15843 81 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 FXNQ16595 210 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 HMBOX1Q6NT76 420 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 GRAMD1CQ8IYS0 662 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF654Q8IZM8 581 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 DPF2Q92785 391 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 RETREG1Q9H6L5 497 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 S100A14Q9HCY8 104 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ABCB10Q9NRK6 738 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 PNMA3Q9UL41 463 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 KCNJ14Q9UNX9 436 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 FLT4P35916 1363 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 FAM153BP0C7A2 387 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 FBLN1P23142 703 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 IL1RL1Q01638 556 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms