RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CD44P16070 742 aaKnown RBP13.05□□□□□ -0.32
CBWD3-208ENST00000612050 SLC5A3P53794 718 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 MAP3K7CLP57077 242 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 MCCD1P59942 119 aaPredicted RBP13.05□□□□□ -0.32
CBWD3-208ENST00000612050 ORC1Q13415 861 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 MTF1Q14872 753 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 ANGPT1Q15389 498 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 CBWD6Q4V339 395 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 CBWD3Q5JTY5 395 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 CBWD5Q5RIA9 395 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 TTI2Q6NXR4 508 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 TMEM150AQ86TG1 271 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 TADA2BQ86TJ2 420 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 FUKQ8N0W3 1084 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 ARL14EPQ8N8R7 260 aaPredicted RBP13.05□□□□□ -0.32
CBWD3-208ENST00000612050 USP13Q92995 863 aaPredicted RBP13.05□□□□□ -0.32
CBWD3-208ENST00000612050 ATP2A3Q93084 1043 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 SLC35C1Q96A29 364 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 ELMO3Q96BJ8 720 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 TMEM176AQ96HP8 235 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 HNRNPABQ99729 332 aaKnown RBP13.05□□□□□ -0.32
CBWD3-208ENST00000612050 SMG9Q9H0W8 520 aaKnown RBP13.05□□□□□ -0.32
CBWD3-208ENST00000612050 CLSTN2Q9H4D0 955 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 APOBEC3GQ9HC16 384 aaKnown RBP13.05□□□□□ -0.32
CBWD3-208ENST00000612050 PNPLA8Q9NP80 782 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 GKN1Q9NS71 199 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 DUS2Q9NX74 493 aaKnown RBP13.05□□□□□ -0.32
CBWD3-208ENST00000612050 HESX1Q9UBX0 185 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 COQ4Q9Y3A0 265 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 NME7Q9Y5B8 376 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 ZNF318Q5VUA4 2279 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 ZNF840PA6NDX5 716 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 NRG2O14511 850 aaPredicted RBP13.05□□□□□ -0.32
CBWD3-208ENST00000612050 AFPP02771 609 aaKnown RBP13.05□□□□□ -0.32
CBWD3-208ENST00000612050 MBL2P11226 248 aaPredicted RBP13.05□□□□□ -0.32
CBWD3-208ENST00000612050 CD72P21854 359 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 RPS9P46781 194 aaKnown RBP13.05□□□□□ -0.32
CBWD3-208ENST00000612050 CUL2Q13617 745 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 RUNX3Q13761 415 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 DGKKQ5KSL6 1271 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 HECTD3Q5T447 861 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 C1orf210Q8IVY1 113 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 C12orf29Q8N999 325 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 FAM81BQ96LP2 452 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 IPO9Q96P70 1041 aaKnown RBP13.05□□□□□ -0.32
CBWD3-208ENST00000612050 KCNK16Q96T55 309 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 CSNK1G1Q9HCP0 422 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 ARHGAP26Q9UNA1 814 aa13.05□□□□□ -0.32
CBWD3-208ENST00000612050 NCANO14594 1321 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 C2orf78A6NCI8 922 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 SPECC1L-ADORA2AF8WAN1 911 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 PMM2O15305 246 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 TADA3O75528 432 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 NFATC1O95644 943 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 PRKCSHP14314 528 aaPredicted RBP13.04□□□□□ -0.32
CBWD3-208ENST00000612050 CD19P15391 556 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 TARSP26639 723 aaKnown RBP13.04□□□□□ -0.32
CBWD3-208ENST00000612050 PSEN1P49768 467 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 USP46P62068 366 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 TCF15Q12870 199 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 SGO2Q562F6 1265 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 CLEC17AQ6ZS10 378 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 PPM1KQ8N3J5 372 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 KIAA1958Q8N8K9 716 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 CCDC26Q8TAB7 109 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 SH3RF2Q8TEC5 729 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 SEMA4DQ92854 862 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 JAKMIP2Q96AA8 810 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 RSPRY1Q96DX4 576 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 ZFYVE19Q96K21 471 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 CDK5RAP1Q96SZ6 601 aaKnown RBP13.04□□□□□ -0.32
CBWD3-208ENST00000612050 DUSP9Q99956 384 aaKnown RBP13.04□□□□□ -0.32
CBWD3-208ENST00000612050 GTSE1Q9NYZ3 720 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 HMGXB4Q9UGU5 601 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 KIAA1257Q9ULG3 409 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 SH3BP1Q9Y3L3 701 aa13.04□□□□□ -0.32
CBWD3-208ENST00000612050 HELZP42694 1942 aaKnown RBP13.03□□□□□ -0.32
CBWD3-208ENST00000612050 TPM2P07951 284 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 RALAP11233 206 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 TCF3P15923 654 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 ACO1P21399 889 aaKnown RBP13.03□□□□□ -0.32
CBWD3-208ENST00000612050 CTHP32929 405 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 MTIF2P46199 727 aaKnown RBP13.03□□□□□ -0.32
CBWD3-208ENST00000612050 TUBP50607 506 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 MARSP56192 900 aaKnown RBP13.03□□□□□ -0.32
CBWD3-208ENST00000612050 SLC7A9P82251 487 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 KCNH2Q12809 1159 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 GRSF1Q12849 480 aaKnown RBP eCLIP13.03□□□□□ -0.32
CBWD3-208ENST00000612050 LRMPQ12912 555 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 USP4Q13107 963 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 ARHGAP18Q8N392 663 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 OSCP1Q8WVF1 389 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 CYP2S1Q96SQ9 504 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 DUSP16Q9BY84 665 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 EBF3Q9H4W6 596 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 LMAN1LQ9HAT1 526 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 GCNT4Q9P109 453 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 TBC1D14Q9P2M4 693 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 CCL26Q9Y258 94 aa13.03□□□□□ -0.32
CBWD3-208ENST00000612050 ANAPC1Q9H1A4 1944 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms