RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 FBXO27Q8NI29 283 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 WWP1Q9H0M0 922 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 RBM38Q9H0Z9 239 aaKnown RBP12.45□□□□□ -0.42
TP53-220ENST00000610623 EHMT1Q9H9B1 1298 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 STRIP2Q9ULQ0 834 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 SOX13Q9UN79 622 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 SORCS3Q9UPU3 1222 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 TELO2Q9Y4R8 837 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 ZNF536O15090 1300 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 BRCA1P38398 1863 aaKnown RBP12.45□□□□□ -0.42
TP53-220ENST00000610623 FAM237BA0A1B0GVD1 139 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 CASQ2O14958 399 aaPredicted RBP12.45□□□□□ -0.42
TP53-220ENST00000610623 BIRC5O15392 142 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 DENRO43583 198 aaKnown RBP12.45□□□□□ -0.42
TP53-220ENST00000610623 SNAP25P60880 206 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 PRR16Q569H4 304 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 C1orf186Q6ZWK4 172 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 FAM178BQ8IXR5 827 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 KATNAL2Q8IYT4 538 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 GDPD5Q8WTR4 605 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 LRRN4Q8WUT4 740 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 SHC3Q92529 594 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 ZDHHC16Q969W1 377 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 FIZ1Q96SL8 496 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 PAFAH2Q99487 392 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 MRPS26Q9BYN8 205 aaKnown RBP12.45□□□□□ -0.42
TP53-220ENST00000610623 ACSS3Q9H6R3 686 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 TUBGCP4Q9UGJ1 667 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 ZMIZ1Q9ULJ6 1067 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 A0A088AWK7 358 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 ZFXP17010 805 aaPredicted RBP12.44□□□□□ -0.42
TP53-220ENST00000610623 CAP2P40123 477 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 VAMP7P51809 220 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 GPX6P59796 221 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 GUCA2AQ02747 115 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 KDSRQ06136 332 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 SLC44A4Q53GD3 710 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 EAPPQ56P03 285 aaPredicted RBP12.44□□□□□ -0.42
TP53-220ENST00000610623 TMEM164Q5U3C3 297 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 CAPN12Q6ZSI9 719 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 CROCCP3Q8IVE0 287 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 RHOT1Q8IXI2 618 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 ATP11CQ8NB49 1132 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 EXD1Q8NHP7 514 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 ACER1Q8TDN7 264 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 TMEM174Q8WUU8 243 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 C7orf26Q96N11 449 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 Q9H521 79 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 DDX18Q9NVP1 670 aaKnown RBP12.44□□□□□ -0.42
TP53-220ENST00000610623 CNTN3Q9P232 1028 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 PPARGC1AQ9UBK2 798 aaKnown RBP12.44□□□□□ -0.42
TP53-220ENST00000610623 BARX2Q9UMQ3 279 aaPredicted RBP12.44□□□□□ -0.42
TP53-220ENST00000610623 MYH11P35749 1972 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 C2orf71A6NGG8 1288 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 LIASO43766 372 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 CCNT2O60583 730 aaKnown RBP12.44□□□□□ -0.42
TP53-220ENST00000610623 MT-ND3P03897 115 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 ECE1P42892 770 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 ARSEP51690 589 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 PLOD1Q02809 727 aaPredicted RBP12.44□□□□□ -0.42
TP53-220ENST00000610623 CYP4A11Q02928 519 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 FOLH1Q04609 750 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 PPP3CAQ08209 521 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 LRRC36Q1X8D7 754 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 HP1BP3Q5SSJ5 553 aaPredicted RBP12.44□□□□□ -0.42
TP53-220ENST00000610623 RNASEH2BQ5TBB1 312 aaKnown RBP12.44□□□□□ -0.42
TP53-220ENST00000610623 LPCAT4Q643R3 524 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 CIAPIN1Q6FI81 312 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 PRPF39Q86UA1 669 aaKnown RBP12.44□□□□□ -0.42
TP53-220ENST00000610623 ALLCQ8N6M5 410 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 RDH13Q8NBN7 331 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 FNDC8Q8TC99 324 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 DDI1Q8WTU0 396 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 TRIM11Q96F44 468 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 APOPT1Q96IL0 206 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 EIF2AK1Q9BQI3 630 aaKnown RBP12.44□□□□□ -0.42
TP53-220ENST00000610623 CCDC106Q9BWC9 280 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 ALG13Q9NP73 1137 aaKnown RBP12.44□□□□□ -0.42
TP53-220ENST00000610623 GINM1Q9NU53 330 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 FEM1BQ9UK73 627 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 ITGB1BP2Q9UKP3 347 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 ADAMTS6Q9UKP5 1117 aa12.44□□□□□ -0.42
TP53-220ENST00000610623 DRG1Q9Y295 367 aaKnown RBP12.44□□□□□ -0.42
TP53-220ENST00000610623 MRPL11Q9Y3B7 192 aaKnown RBP12.44□□□□□ -0.42
TP53-220ENST00000610623 CCDC160A6NGH7 325 aa12.43□□□□□ -0.42
TP53-220ENST00000610623 PROSCO94903 275 aa12.43□□□□□ -0.42
TP53-220ENST00000610623 ASNSP08243 561 aa12.43□□□□□ -0.42
TP53-220ENST00000610623 BGNP21810 368 aa12.43□□□□□ -0.42
TP53-220ENST00000610623 EIF4BP23588 611 aaKnown RBP12.43□□□□□ -0.42
TP53-220ENST00000610623 POLD1P28340 1107 aa12.43□□□□□ -0.42
TP53-220ENST00000610623 ZNF76P36508 570 aa12.43□□□□□ -0.42
TP53-220ENST00000610623 DLG4P78352 724 aa12.43□□□□□ -0.42
TP53-220ENST00000610623 PLCB3Q01970 1234 aa12.43□□□□□ -0.42
TP53-220ENST00000610623 CXCL9Q07325 125 aa12.43□□□□□ -0.42
TP53-220ENST00000610623 GPS1Q13098 491 aa12.43□□□□□ -0.42
TP53-220ENST00000610623 NADK2Q4G0N4 442 aa12.43□□□□□ -0.42
TP53-220ENST00000610623 RNF111Q6ZNA4 994 aa12.43□□□□□ -0.42
TP53-220ENST00000610623 DEFB132Q7Z7B7 95 aa12.43□□□□□ -0.42
TP53-220ENST00000610623 PCGF5Q86SE9 256 aa12.43□□□□□ -0.42
TP53-220ENST00000610623 SLC25A41Q8N5S1 370 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms