RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 CASC4Q6P4E1 433 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 POLNQ7Z5Q5 900 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 TEX9Q8N6V9 391 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 OXNAD1Q96HP4 312 aaPredicted RBP21.31■■□□□ 1
SSBP3-216ENST00000610401 APOL6Q9BWW8 343 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 CEP41Q9BYV8 373 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 ACSS3Q9H6R3 686 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 SLC24A2Q9UI40 661 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 G3BP2Q9UN86 482 aaKnown RBP21.31■■□□□ 1
SSBP3-216ENST00000610401 VWA5AO00534 786 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 LYPLA1O75608 230 aaPredicted RBP21.3■■□□□ 1
SSBP3-216ENST00000610401 ZMPSTE24O75844 475 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 PSMG1O95456 288 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 ETS2P15036 469 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 SP100P23497 879 aaPredicted RBP21.3■■□□□ 1
SSBP3-216ENST00000610401 KDELR1P24390 212 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 VHLP40337 213 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 SAMD7Q7Z3H4 446 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 NAT8LQ8N9F0 302 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 CCDC110Q8TBZ0 833 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 SENP1Q9P0U3 644 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 LOC100653049A0A140TA62 436 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 KRT34O76011 436 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 CALB1P05937 261 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 ATXN3P54252 364 aaPredicted RBP21.3■■□□□ 1
SSBP3-216ENST00000610401 DPYSL3Q14195 570 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 FAM102AQ5T9C2 384 aaPredicted RBP21.3■■□□□ 1
SSBP3-216ENST00000610401 ADGRD1Q6QNK2 874 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 PRPF31Q8WWY3 499 aaKnown RBP21.3■■□□□ 1
SSBP3-216ENST00000610401 NGRNQ9NPE2 291 aaKnown RBP21.3■■□□□ 1
SSBP3-216ENST00000610401 PAPOLBQ9NRJ5 636 aaKnown RBP21.3■■□□□ 1
SSBP3-216ENST00000610401 A0A1B0GVG6 124 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 A6NHS1 94 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 BST1Q10588 318 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 ZNF276Q8N554 614 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 RNF149Q8NC42 400 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 RBM15BQ8NDT2 890 aaKnown RBP21.3■■□□□ 1
SSBP3-216ENST00000610401 SLC35B2Q8TB61 432 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 ZNF333Q96JL9 665 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 ZNF302Q9NR11 478 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 SNCAIPQ9Y6H5 919 aa21.3■■□□□ 1
SSBP3-216ENST00000610401 DCAF8L1A6NGE4 600 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 INO80B-WBP1J3KQ70 363 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 B4GALT5O43286 388 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 STBD1O95210 358 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 ITGAVP06756 1048 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 GRIA1P42261 906 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 CFAP157Q5JU67 520 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 CES4AQ5XG92 561 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 TRIM72Q6ZMU5 477 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 PPFIBP2Q8ND30 876 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 PYDC1Q8WXC3 89 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 INO80BQ9C086 356 aaPredicted RBP21.29■■□□□ 1
SSBP3-216ENST00000610401 C20orf27Q9GZN8 174 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 CYLDQ9NQC7 956 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 CLGNO14967 610 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 ZC3H11AO75152 810 aaKnown RBP eCLIP21.29■■□□□ 11e-8■□□□□ 9.1
SSBP3-216ENST00000610401 CHRM1P11229 460 aaPredicted RBP21.29■■□□□ 1
SSBP3-216ENST00000610401 CDK16Q00536 496 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 SATB1Q01826 763 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 C1orf146Q5VVC0 180 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 TRMT10BQ6PF06 316 aaKnown RBP21.29■■□□□ 1
SSBP3-216ENST00000610401 HACE1Q8IYU2 909 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 FBXO41Q8TF61 875 aa21.29■■□□□ 1
SSBP3-216ENST00000610401 FARP1Q9Y4F1 1045 aaPredicted RBP21.29■■□□□ 1
SSBP3-216ENST00000610401 PDE5AO76074 875 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 DLDP09622 509 aaKnown RBP21.28■■□□□ 1
SSBP3-216ENST00000610401 SNRPFP62306 86 aaKnown RBP21.28■■□□□ 1
SSBP3-216ENST00000610401 IGBP1P78318 339 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 SLC25A3Q00325 362 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 KLHL38Q2WGJ6 581 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 TWNKQ96RR1 684 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 CGRRF1Q99675 332 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 A0A0B4J269 797 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 WDR46O15213 610 aaKnown RBP21.28■■□□□ 1
SSBP3-216ENST00000610401 PIGHQ14442 188 aaPredicted RBP21.28■■□□□ 1
SSBP3-216ENST00000610401 HADHQ16836 314 aaKnown RBP21.28■■□□□ 1
SSBP3-216ENST00000610401 ZC3H12AQ5D1E8 599 aaKnown RBP21.28■■□□□ 1
SSBP3-216ENST00000610401 WASHC2DQ5SRD0 308 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 SLC30A9Q6PML9 568 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 IZUMO2Q6UXV1 221 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 TDRPQ86YL5 185 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 PRR5-ARHGAP8B1AHC4 643 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 I3L4J1 428 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 ERBB2P04626 1255 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 TBXAS1P24557 533 aaPredicted RBP21.28■■□□□ 1
SSBP3-216ENST00000610401 CACNA2D1P54289 1103 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 ARHGAP8P85298 464 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 CAPSQ13938 189 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 DLK2Q6UY11 383 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 MOCOSQ96EN8 888 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 SCOCQ9UIL1 159 aa21.28■■□□□ 1
SSBP3-216ENST00000610401 SLX4Q8IY92 1834 aa21.27■■□□□ 1
SSBP3-216ENST00000610401 CNTNAP2Q9UHC6 1331 aa21.27■■□□□ 1
SSBP3-216ENST00000610401 MYO18AQ92614 2054 aaKnown RBP21.27■■□□□ 1
SSBP3-216ENST00000610401 IQANK1A0A1B0GTG1 560 aa21.27■■□□□ 1
SSBP3-216ENST00000610401 M0QYV0 167 aa21.27■■□□□ 1
SSBP3-216ENST00000610401 TXNDC9O14530 226 aa21.27■■□□□ 1
SSBP3-216ENST00000610401 PPP1R15BQ5SWA1 713 aa21.27■■□□□ 1
SSBP3-216ENST00000610401 NBPF12Q5TAG4 269 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms