RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 NUBP1P53384 320 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 SLC5A3P53794 718 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 MAP3K7CLP57077 242 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 USP46P62068 366 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 MYL5Q02045 173 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 TAF10Q12962 218 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 SKOR2Q2VWA4 1001 aaPredicted RBP15.1■□□□□ 0.01
HDDC2-209ENST00000609477 CDKAL1Q5VV42 579 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 PHLDB3Q6NSJ2 640 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 CAVIN1Q6NZI2 390 aaKnown RBP15.1■□□□□ 0.01
HDDC2-209ENST00000609477 C1orf228Q6PIY5 440 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 TMEM270Q6UE05 265 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 HFE2Q6ZVN8 426 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 SUGP1Q8IWZ8 645 aaKnown RBP15.1■□□□□ 0.01
HDDC2-209ENST00000609477 YAF2Q8IY57 180 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 ANKRD20A12PQ8NF67 263 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 BPIFB1Q8TDL5 484 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 FBXO32Q969P5 355 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 BPIFA3Q9BQP9 254 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 MFSD1Q9H3U5 465 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 SMOC2Q9H3U7 446 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 BRD9Q9H8M2 597 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 SAMSN1Q9NSI8 373 aaKnown RBP15.1■□□□□ 0.01
HDDC2-209ENST00000609477 HESX1Q9UBX0 185 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 APEX2Q9UBZ4 518 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 PCDHB4Q9Y5E5 795 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 PATJQ8NI35 1801 aa15.1■□□□□ 0.01
HDDC2-209ENST00000609477 ANAPC1Q9H1A4 1944 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 FAM86C2PA6NEL3 165 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 ZNF263O14978 683 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 BEST1O76090 585 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 ZDHHC11BP0C7U3 371 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 HDCP19113 662 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 PON1P27169 355 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 PSEN1P49768 467 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 BCAT1P54687 386 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 STARD6P59095 220 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 TYRO3Q06418 890 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 MEA1Q16626 185 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 MIIPQ5JXC2 388 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 RRAGAQ7L523 313 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 MSANTD3Q96H12 275 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 KCNH6Q9H252 994 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 UBE2TQ9NPD8 197 aaPredicted RBP15.09■□□□□ 0.01
HDDC2-209ENST00000609477 ARHGEF3Q9NR81 526 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 SCML2Q9UQR0 700 aa15.09■□□□□ 0.01
HDDC2-209ENST00000609477 LRRC10BA6NIK2 292 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 HHLA1C9JL84 531 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 OLFM2O95897 454 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 OAS1P00973 400 aaKnown RBP15.08■□□□□ 0
HDDC2-209ENST00000609477 CKMP06732 381 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 SLC9A1P19634 815 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 RFX1P22670 979 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 GDI1P31150 447 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 KIF11P52732 1056 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 ZNF132P52740 706 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 SLC7A9P82251 487 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 CNGA2Q16280 664 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 SLC44A4Q53GD3 710 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 LCLAT1Q6UWP7 414 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 ARHGEF19Q8IW93 802 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 SIX5Q8N196 739 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 ZNF276Q8N554 614 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 SCAMP5Q8TAC9 235 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 USP13Q92995 863 aaPredicted RBP15.08■□□□□ 0
HDDC2-209ENST00000609477 NELL2Q99435 816 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 PRRX2Q99811 253 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 CRACR2AQ9BSW2 395 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 TLR8Q9NR97 1041 aaKnown RBP15.08■□□□□ 0
HDDC2-209ENST00000609477 TSPAN16Q9UKR8 245 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 ARHGAP26Q9UNA1 814 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 DAAM1Q9Y4D1 1078 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 ARIH1Q9Y4X5 557 aaPredicted RBP15.08■□□□□ 0
HDDC2-209ENST00000609477 USP3Q9Y6I4 520 aa15.08■□□□□ 0
HDDC2-209ENST00000609477 O00370 1275 aa15.07■□□□□ 0
HDDC2-209ENST00000609477 XPO1O14980 1071 aaKnown RBP15.07■□□□□ 0
HDDC2-209ENST00000609477 PRAMEF12O95522 483 aa15.07■□□□□ 0
HDDC2-209ENST00000609477 CAVIN2O95810 425 aa15.07■□□□□ 0
HDDC2-209ENST00000609477 SETSIPP0DME0 302 aa15.07■□□□□ 0
HDDC2-209ENST00000609477 CD19P15391 556 aa15.07■□□□□ 0
HDDC2-209ENST00000609477 BST2Q10589 180 aaKnown RBP15.07■□□□□ 0
HDDC2-209ENST00000609477 MLF2Q15773 248 aaPredicted RBP15.07■□□□□ 0
HDDC2-209ENST00000609477 RAB41Q5JT25 222 aa15.07■□□□□ 0
HDDC2-209ENST00000609477 HECTD3Q5T447 861 aa15.07■□□□□ 0
HDDC2-209ENST00000609477 ASTLQ6HA08 431 aaPredicted RBP15.07■□□□□ 0
HDDC2-209ENST00000609477 C11orf57Q6ZUT1 292 aaPredicted RBP15.07■□□□□ 0
HDDC2-209ENST00000609477 CCDC186Q7Z3E2 898 aa15.07■□□□□ 0
HDDC2-209ENST00000609477 DDX42Q86XP3 938 aaKnown RBP eCLIP15.07■□□□□ 0
HDDC2-209ENST00000609477 RBBP8NLQ8NC74 664 aaPredicted RBP15.07■□□□□ 0
HDDC2-209ENST00000609477 ST13P5Q8NFI4 369 aaPredicted RBP15.07■□□□□ 0
HDDC2-209ENST00000609477 RSPRY1Q96DX4 576 aa15.07■□□□□ 0
HDDC2-209ENST00000609477 KREMEN1Q96MU8 473 aa15.07■□□□□ 0
HDDC2-209ENST00000609477 DDX23Q9BUQ8 820 aaKnown RBP15.07■□□□□ 0
HDDC2-209ENST00000609477 OSBPL6Q9BZF3 934 aa15.07■□□□□ 0
HDDC2-209ENST00000609477 TRPC7Q9HCX4 862 aa15.07■□□□□ 0
HDDC2-209ENST00000609477 FANCLQ9NW38 375 aa15.07■□□□□ 0
HDDC2-209ENST00000609477 KRBA1A5PL33 1030 aa15.06■□□□□ 0
HDDC2-209ENST00000609477 C2orf78A6NCI8 922 aa15.06■□□□□ 0
HDDC2-209ENST00000609477 SMTNL1A8MU46 457 aa15.06■□□□□ 0
HDDC2-209ENST00000609477 ARNTLO00327 626 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms