RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 NUBP1P53384 320 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 SLC5A3P53794 718 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 MAP3K7CLP57077 242 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 USP46P62068 366 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 MYL5Q02045 173 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 TAF10Q12962 218 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 SKOR2Q2VWA4 1001 aaPredicted RBP15.1■□□□□ 0.01
HDDC2-206ENST00000608461 CDKAL1Q5VV42 579 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 PHLDB3Q6NSJ2 640 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 CAVIN1Q6NZI2 390 aaKnown RBP15.1■□□□□ 0.01
HDDC2-206ENST00000608461 C1orf228Q6PIY5 440 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 TMEM270Q6UE05 265 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 HFE2Q6ZVN8 426 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 SUGP1Q8IWZ8 645 aaKnown RBP15.1■□□□□ 0.01
HDDC2-206ENST00000608461 YAF2Q8IY57 180 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 ANKRD20A12PQ8NF67 263 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 BPIFB1Q8TDL5 484 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 FBXO32Q969P5 355 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 BPIFA3Q9BQP9 254 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 MFSD1Q9H3U5 465 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 SMOC2Q9H3U7 446 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 BRD9Q9H8M2 597 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 SAMSN1Q9NSI8 373 aaKnown RBP15.1■□□□□ 0.01
HDDC2-206ENST00000608461 HESX1Q9UBX0 185 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 APEX2Q9UBZ4 518 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 PCDHB4Q9Y5E5 795 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 PATJQ8NI35 1801 aa15.1■□□□□ 0.01
HDDC2-206ENST00000608461 ANAPC1Q9H1A4 1944 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 FAM86C2PA6NEL3 165 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 ZNF263O14978 683 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 BEST1O76090 585 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 ZDHHC11BP0C7U3 371 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 HDCP19113 662 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 PON1P27169 355 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 PSEN1P49768 467 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 BCAT1P54687 386 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 STARD6P59095 220 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 TYRO3Q06418 890 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 MEA1Q16626 185 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 MIIPQ5JXC2 388 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 RRAGAQ7L523 313 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 MSANTD3Q96H12 275 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 KCNH6Q9H252 994 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 UBE2TQ9NPD8 197 aaPredicted RBP15.09■□□□□ 0.01
HDDC2-206ENST00000608461 ARHGEF3Q9NR81 526 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 SCML2Q9UQR0 700 aa15.09■□□□□ 0.01
HDDC2-206ENST00000608461 LRRC10BA6NIK2 292 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 HHLA1C9JL84 531 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 OLFM2O95897 454 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 OAS1P00973 400 aaKnown RBP15.08■□□□□ 0
HDDC2-206ENST00000608461 CKMP06732 381 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 SLC9A1P19634 815 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 RFX1P22670 979 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 GDI1P31150 447 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 KIF11P52732 1056 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 ZNF132P52740 706 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 SLC7A9P82251 487 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 CNGA2Q16280 664 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 SLC44A4Q53GD3 710 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 LCLAT1Q6UWP7 414 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 ARHGEF19Q8IW93 802 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 SIX5Q8N196 739 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 ZNF276Q8N554 614 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 SCAMP5Q8TAC9 235 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 USP13Q92995 863 aaPredicted RBP15.08■□□□□ 0
HDDC2-206ENST00000608461 NELL2Q99435 816 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 PRRX2Q99811 253 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 CRACR2AQ9BSW2 395 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 TLR8Q9NR97 1041 aaKnown RBP15.08■□□□□ 0
HDDC2-206ENST00000608461 TSPAN16Q9UKR8 245 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 ARHGAP26Q9UNA1 814 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 DAAM1Q9Y4D1 1078 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 ARIH1Q9Y4X5 557 aaPredicted RBP15.08■□□□□ 0
HDDC2-206ENST00000608461 USP3Q9Y6I4 520 aa15.08■□□□□ 0
HDDC2-206ENST00000608461 O00370 1275 aa15.07■□□□□ 0
HDDC2-206ENST00000608461 XPO1O14980 1071 aaKnown RBP15.07■□□□□ 0
HDDC2-206ENST00000608461 PRAMEF12O95522 483 aa15.07■□□□□ 0
HDDC2-206ENST00000608461 CAVIN2O95810 425 aa15.07■□□□□ 0
HDDC2-206ENST00000608461 SETSIPP0DME0 302 aa15.07■□□□□ 0
HDDC2-206ENST00000608461 CD19P15391 556 aa15.07■□□□□ 0
HDDC2-206ENST00000608461 BST2Q10589 180 aaKnown RBP15.07■□□□□ 0
HDDC2-206ENST00000608461 MLF2Q15773 248 aaPredicted RBP15.07■□□□□ 0
HDDC2-206ENST00000608461 RAB41Q5JT25 222 aa15.07■□□□□ 0
HDDC2-206ENST00000608461 HECTD3Q5T447 861 aa15.07■□□□□ 0
HDDC2-206ENST00000608461 ASTLQ6HA08 431 aaPredicted RBP15.07■□□□□ 0
HDDC2-206ENST00000608461 C11orf57Q6ZUT1 292 aaPredicted RBP15.07■□□□□ 0
HDDC2-206ENST00000608461 CCDC186Q7Z3E2 898 aa15.07■□□□□ 0
HDDC2-206ENST00000608461 DDX42Q86XP3 938 aaKnown RBP eCLIP15.07■□□□□ 0
HDDC2-206ENST00000608461 RBBP8NLQ8NC74 664 aaPredicted RBP15.07■□□□□ 0
HDDC2-206ENST00000608461 ST13P5Q8NFI4 369 aaPredicted RBP15.07■□□□□ 0
HDDC2-206ENST00000608461 RSPRY1Q96DX4 576 aa15.07■□□□□ 0
HDDC2-206ENST00000608461 KREMEN1Q96MU8 473 aa15.07■□□□□ 0
HDDC2-206ENST00000608461 DDX23Q9BUQ8 820 aaKnown RBP15.07■□□□□ 0
HDDC2-206ENST00000608461 OSBPL6Q9BZF3 934 aa15.07■□□□□ 0
HDDC2-206ENST00000608461 TRPC7Q9HCX4 862 aa15.07■□□□□ 0
HDDC2-206ENST00000608461 FANCLQ9NW38 375 aa15.07■□□□□ 0
HDDC2-206ENST00000608461 KRBA1A5PL33 1030 aa15.06■□□□□ 0
HDDC2-206ENST00000608461 C2orf78A6NCI8 922 aa15.06■□□□□ 0
HDDC2-206ENST00000608461 SMTNL1A8MU46 457 aa15.06■□□□□ 0
HDDC2-206ENST00000608461 ARNTLO00327 626 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms