RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 TOGARAM2Q6ZUX3 1019 aa12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 OSTM1Q86WC4 334 aa12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 GPBP1Q86WP2 473 aa12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ADGRF2Q8IZF7 708 aa12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 TMEM86AQ8N2M4 240 aa12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 FUBP3Q96I24 572 aaKnown RBP eCLIP12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ZHX3Q9H4I2 956 aa12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 PARVGQ9HBI0 331 aa12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 CACNA2D2Q9NY47 1150 aa12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 CYP8B1Q9UNU6 501 aa12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ATG2BQ96BY7 2078 aa12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 A0A0A0MRY4 1105 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 TBC1D3BA6NDS4 549 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ZNF840PA6NDX5 716 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 TRAK2O60296 914 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ITGB3P05106 788 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 HOXB2P14652 356 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 PFKLP17858 780 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 WASP42768 502 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 MAGEA11P43364 429 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ZNF131P52739 623 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 TFAMQ00059 246 aaKnown RBP12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 GRIK2Q13002 908 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 TMEM119Q4V9L6 283 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 C10orf76Q5T2E6 689 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 TRMT11Q7Z4G4 463 aaKnown RBP12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SLCO6A1Q86UG4 719 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 CCDC83Q8IWF9 413 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 RGL4Q8IZJ4 473 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 PHTF2Q8N3S3 785 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 KCTD17Q8N5Z5 321 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ZNF513Q8N8E2 541 aaPredicted RBP12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 KIAA1958Q8N8K9 716 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 MYLPFQ96A32 169 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ERLEC1Q96DZ1 483 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 CRELD1Q96HD1 420 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 FAM84AQ96KN4 292 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 RNF38Q9H0F5 515 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 IKZF4Q9H2S9 585 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 FAM124BQ9H5Z6 455 aaPredicted RBP12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SUSD2Q9UGT4 822 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 PCOLCE2Q9UKZ9 415 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 AGAP1Q9UPQ3 857 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 GON4LQ3T8J9 2241 aa12.59□□□□□ -0.39
PDLIM1P1-201ENST00000604187 HECTD1Q9ULT8 2610 aa12.58□□□□□ -0.39
PDLIM1P1-201ENST00000604187 CITO14578 2027 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 CBFA2T3O75081 653 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 TBCAO75347 108 aaKnown RBP12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 ZNF217O75362 1048 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 IL18RAPO95256 599 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 OLFM2O95897 454 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 ABL1P00519 1130 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 PRB1P04280 392 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 PLCG1P19174 1290 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 PCSK1P29120 753 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 NEK4P51957 841 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 WNT7BP56706 349 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 PSMC1P62191 440 aaKnown RBP12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 DHX8Q14562 1220 aaKnown RBP12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 LY6G5CQ5SRR4 150 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 SCARA3Q6AZY7 606 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 SLFN12LQ6IEE8 588 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 CRELD2Q6UXH1 353 aaPredicted RBP12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 C4orf50Q6ZRC1 276 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 DENND5BQ6ZUT9 1274 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 MARCH9Q86YJ5 346 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 MIB1Q86YT6 1006 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 NAV2Q8IVL1 2488 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 C1orf127Q8N9H9 656 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 SPATA17Q96L03 361 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 FIZ1Q96SL8 496 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 SNX9Q9Y5X1 595 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 STYXL1Q9Y6J8 313 aa12.58□□□□□ -0.4
PDLIM1P1-201ENST00000604187 ADAMTS20P59510 1910 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 A0A1W2PQF6 199 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 VWA3AA6NCI4 1184 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 ZBTB24O43167 697 aaPredicted RBP12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 ATP2C2O75185 946 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 TULP3O75386 442 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 KRT18P05783 430 aaKnown RBP12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 MBL2P11226 248 aaPredicted RBP12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 GNSP15586 552 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 NDUFV2P19404 249 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 ANXA13P27216 316 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 GRIK1P39086 918 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 LHX1P48742 406 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 GTF2BQ00403 316 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 CYP4F3Q08477 520 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 C19orf57Q0VDD7 668 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 SYCP2LQ5T4T6 812 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 BTBD8Q5XKL5 378 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 VSTM1Q6UX27 236 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 GLRX5Q86SX6 157 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 NT5DC4Q86YG4 428 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 ETFBKMTQ8IXQ9 262 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 TOP6BLQ8N6T0 577 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 LRRC52Q8N7C0 313 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 NAT16Q8N8M0 369 aa12.57□□□□□ -0.4
PDLIM1P1-201ENST00000604187 FAM184AQ8NB25 1140 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms