RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 DUSP10Q9Y6W6 482 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 ATP6V1B2P21281 511 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 STOX1Q6ZVD7 989 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 PSMA8Q8TAA3 256 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 ZNF560Q96MR9 790 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 TRIM64CA6NLI5 447 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 ASAP3Q8TDY4 903 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 PLGRKTQ9HBL7 147 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 EHD3Q9NZN3 535 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 PSMG1O95456 288 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 RALAP11233 206 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 ACOT2P49753 483 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 LRRC74AQ0VAA2 488 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 SLC18A3Q16572 532 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 TTC39BQ5VTQ0 682 aaPredicted RBP9□□□□□ -0.97
CSMD1-216ENST00000602557 PCYOX1LQ8NBM8 494 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 SEPT1Q8WYJ6 367 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 DGCR6LQ9BY27 220 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 ROPN1BQ9BZX4 212 aaPredicted RBP9□□□□□ -0.97
CSMD1-216ENST00000602557 TOR3AQ9H497 397 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 ROPN1Q9HAT0 212 aaPredicted RBP9□□□□□ -0.97
CSMD1-216ENST00000602557 ARMCX1Q9P291 453 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 NFKBIL1Q9UBC1 381 aaPredicted RBP9□□□□□ -0.97
CSMD1-216ENST00000602557 PMF1-BGLAPU3KQ54 211 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 TULP2O00295 520 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 FAM153BP0C7A2 387 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 FLT3P36888 993 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 ATP12AP54707 1039 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 FAM153CQ494X1 144 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 PDZK1Q5T2W1 519 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 SWT1Q5T5J6 900 aaKnown RBP9□□□□□ -0.97
CSMD1-216ENST00000602557 C3orf62Q6ZUJ4 267 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 PABPC5Q96DU9 382 aaKnown RBP9□□□□□ -0.97
CSMD1-216ENST00000602557 SERHL2Q9H4I8 314 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 SERHLQ9NQF3 203 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 LOC100506127A0A0U1RQW1 187 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 FOXN3O00409 490 aaPredicted RBP9□□□□□ -0.97
CSMD1-216ENST00000602557 CPB1P15086 417 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 LRPAP1P30533 357 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 AQP5P55064 265 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 MYBPC2Q14324 1141 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 ZNF284Q2VY69 593 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 FAM45BPQ6NSW5 357 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 DDX53Q86TM3 631 aaKnown RBP9□□□□□ -0.97
CSMD1-216ENST00000602557 EME2A4GXA9 379 aaPredicted RBP9□□□□□ -0.97
CSMD1-216ENST00000602557 CYP27B1O15528 508 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 LPIN1Q14693 890 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 ZNF57Q68EA5 555 aaPredicted RBP9□□□□□ -0.97
CSMD1-216ENST00000602557 REEP2Q9BRK0 252 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 C1orf50Q9BV19 199 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 TRIM62Q9BVG3 475 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 PIDD1Q9HB75 910 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 ZC3H4Q9UPT8 1303 aaKnown RBP9□□□□□ -0.97
CSMD1-216ENST00000602557 NR5A2O00482 541 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 TP53BP2Q13625 1128 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 PDK3Q15120 406 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 NAB2Q15742 525 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 TTMPQ5BVD1 217 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 ANKS3Q6ZW76 656 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 CCSER2Q9H7U1 834 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 RNPEPL1Q9HAU8 725 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 FBXO9Q9UK97 447 aaPredicted RBP9□□□□□ -0.97
CSMD1-216ENST00000602557 CDY2AQ9Y6F7 541 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 CDY1Q9Y6F8 540 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 CBFA2T3O75081 653 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 PKN3Q6P5Z2 889 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 APPL2Q8NEU8 664 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 CELF1Q92879 486 aaKnown RBP9□□□□□ -0.97
CSMD1-216ENST00000602557 ERP44Q9BS26 406 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 TASP1Q9H6P5 420 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 FAM49BQ9NUQ9 324 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 ZNF263O14978 683 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 PRKCBP05771 671 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 EFNA5P52803 228 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 SPP2Q13103 211 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 BTBD10Q9BSF8 475 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 APOL5Q9BWW9 433 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 CD274Q9NZQ7 290 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 GCLCP48506 637 aaPredicted RBP8.99□□□□□ -0.97
CSMD1-216ENST00000602557 DPYDQ12882 1025 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 WDR93Q6P2C0 686 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 EFHBQ8N7U6 833 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 OR6Y1Q8NGX8 325 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 PIN4Q9Y237 131 aaKnown RBP8.99□□□□□ -0.97
CSMD1-216ENST00000602557 PCDHA10Q9Y5I2 948 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 PRR36Q9H6K5 1346 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 UPP2O95045 317 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 NT5C2P49902 561 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 CYP4A22Q5TCH4 519 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 SULT1C3Q6IMI6 304 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 OTUD5Q96G74 571 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 PKP3Q9Y446 797 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 POLRMTO00411 1230 aaKnown RBP8.99□□□□□ -0.97
CSMD1-216ENST00000602557 EYA4O95677 639 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 GALCP54803 685 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 AASDHQ4L235 1098 aaPredicted RBP8.99□□□□□ -0.97
CSMD1-216ENST00000602557 SPANXN2Q5MJ10 180 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 C6orf183Q5T699 404 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 FAM71DQ8N9W8 422 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 ELOVL6Q9H5J4 265 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms