RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, human

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH2D3A-208	ENST00000599563	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.62	□□□□□ -0.23
SH2D3A-208	ENST00000599563	APOBEC3G	Q9HC16	384 aa	Known RBP	13.62	□□□□□ -0.23
SH2D3A-208	ENST00000599563	SIX2	Q9NPC8	291 aa		13.62	□□□□□ -0.23
SH2D3A-208	ENST00000599563	GCNT4	Q9P109	453 aa		13.62	□□□□□ -0.23
SH2D3A-208	ENST00000599563	NXF1	Q9UBU9	619 aa	Known RBP	13.62	□□□□□ -0.23
SH2D3A-208	ENST00000599563	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.62	□□□□□ -0.23
SH2D3A-208	ENST00000599563	PIAS3	Q9Y6X2	628 aa		13.62	□□□□□ -0.23
SH2D3A-208	ENST00000599563	FANCM	Q8IYD8	2048 aa		13.62	□□□□□ -0.23
SH2D3A-208	ENST00000599563	HELZ	P42694	1942 aa	Known RBP	13.62	□□□□□ -0.23
SH2D3A-208	ENST00000599563	SLC38A8	A6NNN8	435 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563		A8MXQ7	604 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	NRG2	O14511	850 aa	Predicted RBP	13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	STX10	O60499	249 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	PDGFRB	P09619	1106 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	PFKL	P17858	780 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	LMO2	P25791	158 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	PPP3CC	P48454	512 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	UBASH3A	P57075	661 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	CYP4F8	P98187	520 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	CYP27A1	Q02318	531 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	UBXN1	Q04323	297 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	ZNF268	Q14587	947 aa	Predicted RBP	13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	NR1I3	Q14994	352 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	SYCP1	Q15431	976 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	STXBP5	Q5T5C0	1151 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	GJB7	Q6PEY0	223 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	SARM1	Q6SZW1	724 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	C1orf210	Q8IVY1	113 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	ARHGEF19	Q8IW93	802 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	SCN4B	Q8IWT1	228 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	KAT5	Q92993	513 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	TATDN2	Q93075	761 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	MYLPF	Q96A32	169 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	LSM14B	Q9BX40	385 aa	Known RBP	13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	IMPG2	Q9BZV3	1241 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	INTS2	Q9H0H0	1204 aa	Known RBP	13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	CRTAC1	Q9NQ79	661 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	FAM86C1	Q9NVL1	165 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	RAB20	Q9NX57	234 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	SIK3	Q9Y2K2	1263 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	CACNA1I	Q9P0X4	2223 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	MYO16	Q9Y6X6	1858 aa		13.61	□□□□□ -0.23
SH2D3A-208	ENST00000599563	ARNTL	O00327	626 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	EPHB6	O15197	1021 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	PMM2	O15305	246 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	P4HA2	O15460	535 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	LAMTOR5	O43504	91 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	ATP2C2	O75185	946 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	ASS1	P00966	412 aa	Known RBP	13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	TPM2	P07951	284 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	PTPN1	P18031	435 aa	Known RBP	13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	PON1	P27169	355 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	GRIK1	P39086	918 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	PBX1	P40424	430 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	RAP1GAP	P47736	663 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	KPNA1	P52294	538 aa	Predicted RBP	13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	PSMC1	P62191	440 aa	Known RBP	13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	NOP14	P78316	857 aa	Known RBP	13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	AMPD2	Q01433	879 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	ZNF528	Q3MIS6	628 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	TRIM65	Q6PJ69	517 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	SCARA5	Q6ZMJ2	495 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	GBP6	Q6ZN66	633 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	RALGPS2	Q86X27	583 aa	Predicted RBP	13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	B3GALNT2	Q8NCR0	500 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	CCDC150	Q8NCX0	1101 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	EHBP1	Q8NDI1	1231 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	FAM3C	Q92520	227 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	NKD2	Q969F2	451 aa	Predicted RBP	13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	PCED1B	Q96HM7	432 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	C8orf48	Q96LL4	319 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	MRPL45	Q9BRJ2	306 aa	Known RBP	13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	SLC46A2	Q9BY10	475 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	SDCBP2	Q9H190	292 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	GRPEL1	Q9HAV7	217 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	TDP1	Q9NUW8	608 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	FBXO4	Q9UKT5	387 aa		13.6	□□□□□ -0.23
SH2D3A-208	ENST00000599563	TRAV19	A0A0A6YYK7	116 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	GTPBP10	A4D1E9	387 aa	Known RBP	13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	GOLGA6L3	A6NEY3	463 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	GFRA3	O60609	400 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	PRAMEF12	O95522	483 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	USP17L7	P0C7H9	530 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	CD72	P21854	359 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	BDNF	P23560	247 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	TARS	P26639	723 aa	Known RBP	13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	ZNF75D	P51815	510 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	CDR1	P51861	262 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	LRRC32	Q14392	662 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	PPP2R5D	Q14738	602 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	EXOC3L4	Q17RC7	722 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	FILIP1L	Q4L180	1135 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	MDH1B	Q5I0G3	518 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	MAMSTR	Q6ZN01	415 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	DENND5B	Q6ZUT9	1274 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	TMEM150A	Q86TG1	271 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	MAB21L3	Q8N8X9	362 aa		13.59	□□□□□ -0.23
SH2D3A-208	ENST00000599563	EXOC4	Q96A65	974 aa		13.59	□□□□□ -0.23

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