RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 TRAPPC11Q7Z392 1133 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 TMEFF1Q8IYR6 380 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 ADGRG2Q8IZP9 1017 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 IL17RCQ8NAC3 791 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 DEFB124Q8NES8 71 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 OR6B3Q8NGW1 331 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 ERLEC1Q96DZ1 483 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 TTLL2Q9BWV7 592 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 SNX25Q9H3E2 840 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 TMEM9BQ9NQ34 198 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 FOXD4L1Q9NU39 408 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 CLIC2O15247 247 aa20.48■□□□□ 0.87
IRF3-222ENST00000599144 PROS1P07225 676 aa20.48■□□□□ 0.87
IRF3-222ENST00000599144 MBL2P11226 248 aaPredicted RBP20.48■□□□□ 0.87
IRF3-222ENST00000599144 PTGER3P43115 390 aa20.48■□□□□ 0.87
IRF3-222ENST00000599144 SLC7A9P82251 487 aa20.48■□□□□ 0.87
IRF3-222ENST00000599144 UNQ6494/PRO21346Q6UXR6 183 aa20.48■□□□□ 0.87
IRF3-222ENST00000599144 CCDC65Q8IXS2 484 aa20.48■□□□□ 0.87
IRF3-222ENST00000599144 DEFB119Q8N690 84 aa20.48■□□□□ 0.87
IRF3-222ENST00000599144 CCDC127Q96BQ5 260 aa20.48■□□□□ 0.87
IRF3-222ENST00000599144 FNBP1Q96RU3 617 aa20.48■□□□□ 0.87
IRF3-222ENST00000599144 TMEM74BQ9NUR3 256 aa20.48■□□□□ 0.87
IRF3-222ENST00000599144 MBD1Q9UIS9 605 aaPredicted RBP20.48■□□□□ 0.87
IRF3-222ENST00000599144 TRIM66O15016 1216 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 KAT7O95251 611 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 OLFM2O95897 454 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 OAS1P00973 400 aaKnown RBP20.47■□□□□ 0.87
IRF3-222ENST00000599144 SYT1P21579 422 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 GNL1P36915 607 aaPredicted RBP20.47■□□□□ 0.87
IRF3-222ENST00000599144 MAPK8P45983 427 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 CYP2J2P51589 502 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 CUL4AQ13619 759 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 WDR49Q8IV35 697 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 NELFCDQ8IXH7 590 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 NAT16Q8N8M0 369 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 OLIG1Q8TAK6 271 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 HMGB4Q8WW32 186 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 WBP2Q969T9 261 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 C8orf48Q96LL4 319 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 PNKPQ96T60 521 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 B3GNT5Q9BYG0 378 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 BCCIPQ9P287 314 aaKnown RBP eCLIP20.47■□□□□ 0.87
IRF3-222ENST00000599144 ZMIZ1Q9ULJ6 1067 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 WASF3Q9UPY6 502 aa20.47■□□□□ 0.87
IRF3-222ENST00000599144 ZNF638Q14966 1978 aaKnown RBP20.46■□□□□ 0.87
IRF3-222ENST00000599144 ADAM23O75077 832 aa20.46■□□□□ 0.87
IRF3-222ENST00000599144 PTPN1P18031 435 aaKnown RBP20.46■□□□□ 0.87
IRF3-222ENST00000599144 TNNI1P19237 187 aa20.46■□□□□ 0.87
IRF3-222ENST00000599144 PDE6CP51160 858 aa20.46■□□□□ 0.87
IRF3-222ENST00000599144 MAPRE1Q15691 268 aaKnown RBP20.46■□□□□ 0.87
IRF3-222ENST00000599144 TRIM61Q5EBN2 209 aa20.46■□□□□ 0.87
IRF3-222ENST00000599144 LY6G5CQ5SRR4 150 aa20.46■□□□□ 0.87
IRF3-222ENST00000599144 ARHGEF4Q9NR80 690 aa20.46■□□□□ 0.87
IRF3-222ENST00000599144 NXF1Q9UBU9 619 aaKnown RBP20.46■□□□□ 0.87
IRF3-222ENST00000599144 CFAP47Q6ZTR5 3102 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 SPAG17Q6Q759 2223 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 TCRBV21S2A2A0A5A6 115 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 TRIM24O15164 1050 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 MAP3K13O43283 966 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 TGFB1I1O43294 461 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 APODP05090 189 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 ADH5P11766 374 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 CASP1P29466 404 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 P2RY2P41231 377 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 WASP42768 502 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 KIR2DL1P43626 348 aaPredicted RBP20.45■□□□□ 0.86
IRF3-222ENST00000599144 MYL6P60660 151 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 NOP14P78316 857 aaKnown RBP20.45■□□□□ 0.86
IRF3-222ENST00000599144 MRPS21P82921 87 aaKnown RBP20.45■□□□□ 0.86
IRF3-222ENST00000599144 SLC39A14Q15043 492 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 SNRNP35Q16560 246 aaKnown RBP20.45■□□□□ 0.86
IRF3-222ENST00000599144 WDR72Q3MJ13 1102 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 TDRD10Q5VZ19 366 aaKnown RBP20.45■□□□□ 0.86
IRF3-222ENST00000599144 PGBD3Q8N328 593 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 ZNF516Q92618 1163 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 KCNK16Q96T55 309 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 GZF1Q9H116 711 aaPredicted RBP20.45■□□□□ 0.86
IRF3-222ENST00000599144 AGPAT3Q9NRZ7 376 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 CHORDC1Q9UHD1 332 aaPredicted RBP20.45■□□□□ 0.86
IRF3-222ENST00000599144 MYO16Q9Y6X6 1858 aa20.45■□□□□ 0.86
IRF3-222ENST00000599144 KIAA1549LQ6ZVL6 1849 aa20.44■□□□□ 0.86
IRF3-222ENST00000599144 A8MXQ7 604 aa20.44■□□□□ 0.86
IRF3-222ENST00000599144 COCHO43405 550 aa20.44■□□□□ 0.86
IRF3-222ENST00000599144 IRF1P10914 325 aa20.44■□□□□ 0.86
IRF3-222ENST00000599144 CASP4P49662 377 aa20.44■□□□□ 0.86
IRF3-222ENST00000599144 CDH8P55286 799 aa20.44■□□□□ 0.86
IRF3-222ENST00000599144 SURF1Q15526 300 aa20.44■□□□□ 0.86
IRF3-222ENST00000599144 MAP7D1Q3KQU3 841 aa20.44■□□□□ 0.86
IRF3-222ENST00000599144 C11orf74Q86VG3 221 aa20.44■□□□□ 0.86
IRF3-222ENST00000599144 CCDC26Q8TAB7 109 aa20.44■□□□□ 0.86
IRF3-222ENST00000599144 SCAMP5Q8TAC9 235 aa20.44■□□□□ 0.86
IRF3-222ENST00000599144 FBXO32Q969P5 355 aa20.44■□□□□ 0.86
IRF3-222ENST00000599144 ZFRQ96KR1 1074 aaKnown RBP20.44■□□□□ 0.86
IRF3-222ENST00000599144 CGRRF1Q99675 332 aa20.44■□□□□ 0.86
IRF3-222ENST00000599144 TMEM121BQ9BXQ6 578 aaPredicted RBP20.44■□□□□ 0.86
IRF3-222ENST00000599144 SMYD3Q9H7B4 428 aa20.44■□□□□ 0.86
IRF3-222ENST00000599144 UPF2Q9HAU5 1272 aaKnown RBP20.44■□□□□ 0.86
IRF3-222ENST00000599144 MTMR6Q9Y217 621 aa20.44■□□□□ 0.86
IRF3-222ENST00000599144 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.43■□□□□ 0.86
IRF3-222ENST00000599144 KIAA0391O15091 583 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms