RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 SPPL3Q8TCT6 385 aa8.35□□□□□ -1.07
VMP1-213ENST00000591877 KRTAP9-3Q9BYQ3 159 aa8.35□□□□□ -1.07
VMP1-213ENST00000591877 B4GALT6Q9UBX8 382 aa8.35□□□□□ -1.07
VMP1-213ENST00000591877 PLAGL2Q9UPG8 496 aa8.35□□□□□ -1.07
VMP1-213ENST00000591877 RWDD3Q9Y3V2 267 aa8.35□□□□□ -1.07
VMP1-213ENST00000591877 DENND3A2RUS2 1198 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 ZNF503-AS2A6NEH8 195 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 BTBD18B2RXH4 712 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 TBX3O15119 743 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 MAFO75444 373 aaPredicted RBP8.34□□□□□ -1.07
VMP1-213ENST00000591877 CSDE1O75534 798 aaKnown RBP8.34□□□□□ -1.07
VMP1-213ENST00000591877 MMP1P03956 469 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 CKMP06732 381 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 DARSP14868 501 aaKnown RBP8.34□□□□□ -1.07
VMP1-213ENST00000591877 GCFC2P16383 781 aaKnown RBP8.34□□□□□ -1.07
VMP1-213ENST00000591877 XBP1P17861 261 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 KCNA5P22460 613 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 TMOD1P28289 359 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 KRT2P35908 639 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 MECP2P51608 486 aaKnown RBP8.34□□□□□ -1.07
VMP1-213ENST00000591877 NPEPPSP55786 919 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 PSMC5P62195 406 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 HYAL1Q12794 435 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 LEXMQ3ZCV2 418 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 TIGD5Q53EQ6 642 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 LRRC55Q6ZSA7 311 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 FAM43BQ6ZT52 329 aaPredicted RBP8.34□□□□□ -1.07
VMP1-213ENST00000591877 ZSWIM9Q86XI8 627 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 CNTD1Q8N815 330 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 IGSF22Q8N9C0 903 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 CHST14Q8NCH0 376 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 NEK9Q8TD19 979 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 WASF1Q92558 559 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 P2RX5Q93086 422 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 FAM20AQ96MK3 541 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 MAP7D2Q96T17 732 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 C11orf84Q9BUA3 381 aaPredicted RBP8.34□□□□□ -1.07
VMP1-213ENST00000591877 LMAN2LQ9H0V9 348 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 NSUN3Q9H649 340 aaKnown RBP8.34□□□□□ -1.07
VMP1-213ENST00000591877 CWH43Q9H720 699 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 ELAC1Q9H777 363 aaKnown RBP8.34□□□□□ -1.07
VMP1-213ENST00000591877 CD320Q9NPF0 282 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 CRTAC1Q9NQ79 661 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 C1orf112Q9NSG2 853 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 TMEM161AQ9NX61 479 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 RGL1Q9NZL6 768 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 CLEC1BQ9P126 229 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 TMEFF2Q9UIK5 374 aaPredicted RBP8.34□□□□□ -1.07
VMP1-213ENST00000591877 ZKSCAN5Q9Y2L8 839 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 PCDHB7Q9Y5E2 793 aa8.34□□□□□ -1.07
VMP1-213ENST00000591877 A0A087WZ62 844 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 NPHP3-ACAD11A0A0J9YXS1 232 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 TBKBP1A7MCY6 615 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 H3BQ06 376 aaPredicted RBP8.33□□□□□ -1.08
VMP1-213ENST00000591877 ARNTLO00327 626 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 CSPG5O95196 566 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 ZSCAN22P10073 491 aaPredicted RBP8.33□□□□□ -1.08
VMP1-213ENST00000591877 IL9P15248 144 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 ATF7P17544 494 aaPredicted RBP8.33□□□□□ -1.08
VMP1-213ENST00000591877 QARSP47897 775 aaKnown RBP8.33□□□□□ -1.08
VMP1-213ENST00000591877 CLCN7P51798 805 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 DLX2Q07687 328 aaPredicted RBP8.33□□□□□ -1.08
VMP1-213ENST00000591877 HLTFQ14527 1009 aaKnown RBP eCLIP8.33□□□□□ -1.08
VMP1-213ENST00000591877 EPHA7Q15375 998 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 GAB4Q2WGN9 574 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 TMEM177Q53S58 311 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 RTP2Q5QGT7 225 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 CYP2R1Q6VVX0 501 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 RNF111Q6ZNA4 994 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 ADGRD2Q7Z7M1 963 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 ECHDC2Q86YB7 292 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 DIS3L2Q8IYB7 885 aaKnown RBP8.33□□□□□ -1.08
VMP1-213ENST00000591877 PABPC5Q96DU9 382 aaKnown RBP8.33□□□□□ -1.08
VMP1-213ENST00000591877 DYDC2Q96IM9 177 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 SCYL1Q96KG9 808 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 CASD1Q96PB1 797 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 FDXACB1Q9BRP7 624 aaPredicted RBP8.33□□□□□ -1.08
VMP1-213ENST00000591877 PRDM7Q9NQW5 492 aa8.33□□□□□ -1.08
VMP1-213ENST00000591877 C5orf42Q9H799 3197 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 FGF10O15520 208 aaPredicted RBP8.32□□□□□ -1.08
VMP1-213ENST00000591877 LINC01565O15544 149 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 AKAP10O43572 662 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 ULK1O75385 1050 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 SLITRK3O94933 977 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 SYPP08247 313 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 IL2P60568 153 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 PIN1Q13526 163 aaPredicted RBP8.32□□□□□ -1.08
VMP1-213ENST00000591877 CTTNQ14247 550 aaKnown RBP8.32□□□□□ -1.08
VMP1-213ENST00000591877 KCNMB1Q16558 191 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 ARHGAP44Q17R89 818 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 CLLU1OSQ5K130 101 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 NCAPH2Q6IBW4 605 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 RHPN2Q8IUC4 686 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 PASD1Q8IV76 773 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 CCDC83Q8IWF9 413 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 C4orf19Q8IY42 314 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 RCBTB1Q8NDN9 531 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 POF1BQ8WVV4 589 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 MTMR9Q96QG7 549 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 NAP1L4Q99733 375 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms