RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 FGF13Q92913 245 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 PHKBQ93100 1093 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 PPP1R14AQ96A00 147 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 PHF20Q9BVI0 1012 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 RBM12Q9NTZ6 932 aaKnown RBP8.67□□□□□ -1.02
SMAD4-209ENST00000589941 MARCH5Q9NX47 278 aa8.67□□□□□ -1.02
SMAD4-209ENST00000589941 PTPRDP23468 1912 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 COL5A1P20908 1838 aaPredicted RBP8.66□□□□□ -1.02
SMAD4-209ENST00000589941 NCANO14594 1321 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 B4E1Z4 1266 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 AURKAO14965 403 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 ZBTB5O15062 677 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 TBX1O43435 398 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 CSDE1O75534 798 aaKnown RBP8.66□□□□□ -1.02
SMAD4-209ENST00000589941 STAM2O75886 525 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 DDHD2O94830 711 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 KCNH1O95259 989 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 C22orf31O95567 290 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 NOP2P46087 812 aaKnown RBP8.66□□□□□ -1.02
SMAD4-209ENST00000589941 RAP1GAPP47736 663 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 CLCN3P51790 818 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 CRYBB1P53674 252 aaPredicted RBP8.66□□□□□ -1.02
SMAD4-209ENST00000589941 TERF1P54274 439 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 NUCB2P80303 420 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 CCDC173Q0VFZ6 552 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 CYP26C1Q6V0L0 522 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 LONP2Q86WA8 852 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 PALB2Q86YC2 1186 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 LILRA2Q8N149 483 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 NME8Q8N427 588 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 DEFB124Q8NES8 71 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 LRIG1Q96JA1 1093 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 MRGPRX3Q96LB0 322 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 RPS6KC1Q96S38 1066 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 PIGSQ96S52 555 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 PLCD4Q9BRC7 762 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 HERC2P3Q9BVR0 1158 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 MRPL17Q9NRX2 175 aaKnown RBP8.66□□□□□ -1.02
SMAD4-209ENST00000589941 MAP3K20Q9NYL2 800 aaKnown RBP8.66□□□□□ -1.02
SMAD4-209ENST00000589941 TNFRSF10DQ9UBN6 386 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 GPR160Q9UJ42 338 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 MSRB2Q9Y3D2 182 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 RNF114Q9Y508 228 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 PCNX2A6NKB5 2137 aa8.66□□□□□ -1.02
SMAD4-209ENST00000589941 A0A0U1RQF3 1178 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 LNP1A1A4G5 178 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 EIF4E1BA6NMX2 242 aaKnown RBP8.65□□□□□ -1.02
SMAD4-209ENST00000589941 NCAM2O15394 837 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 TGM5O43548 720 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 NRDCO43847 1150 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 RAB11FIP3O75154 756 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 BAG4O95429 457 aaKnown RBP8.65□□□□□ -1.02
SMAD4-209ENST00000589941 URODP06132 367 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 ITGAVP06756 1048 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 PARP1P09874 1014 aaKnown RBP8.65□□□□□ -1.02
SMAD4-209ENST00000589941 NAT2P11245 290 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 RPL17P18621 184 aaKnown RBP8.65□□□□□ -1.02
SMAD4-209ENST00000589941 ENDOUP21128 410 aaKnown RBP8.65□□□□□ -1.02
SMAD4-209ENST00000589941 CXCL12P48061 93 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 PXNP49023 591 aaPredicted RBP8.65□□□□□ -1.02
SMAD4-209ENST00000589941 PFKPQ01813 784 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 SV2CQ496J9 727 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 USP17L6PQ6QN14 398 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 MTSS1LQ765P7 747 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 CKAP2LQ8IYA6 745 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 ENAHQ8N8S7 591 aaPredicted RBP8.65□□□□□ -1.02
SMAD4-209ENST00000589941 PDLIM2Q96JY6 352 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 TTC14Q96N46 770 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 LMAN1LQ9HAT1 526 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 HCFC1R1Q9NWW0 138 aa8.65□□□□□ -1.02
SMAD4-209ENST00000589941 NUP210Q8TEM1 1887 aaPredicted RBP8.64□□□□□ -1.03
SMAD4-209ENST00000589941 SALL3Q9BXA9 1300 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 SPAARA0A1B0GVQ0 90 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 GOLGA6L22H0YM25 854 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 PYCARD-AS1I3L0S3 204 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 PAX4O43316 350 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 EPB41L2O43491 1005 aaKnown RBP8.64□□□□□ -1.03
SMAD4-209ENST00000589941 FGAP02671 866 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 SOD2P04179 222 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 CHRNB1P11230 501 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 FCARP24071 287 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 ACTR2P61160 394 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 AMPD2Q01433 879 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 SLC14A2Q15849 920 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 SLC10A6Q3KNW5 377 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 HSF5Q4G112 596 aaPredicted RBP8.64□□□□□ -1.03
SMAD4-209ENST00000589941 NOMO2Q5JPE7 1267 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 SLCO6A1Q86UG4 719 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 TRIM59Q8IWR1 403 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 RNF168Q8IYW5 571 aaPredicted RBP8.64□□□□□ -1.03
SMAD4-209ENST00000589941 ABCA7Q8IZY2 2146 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 NAT16Q8N8M0 369 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 JMJD8Q96S16 334 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 NELL2Q99435 816 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 KAT14Q9H8E8 782 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 ZDHHC7Q9NXF8 308 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 MAD2L2Q9UI95 211 aa8.64□□□□□ -1.03
SMAD4-209ENST00000589941 PRG3Q9Y2Y8 225 aaPredicted RBP8.64□□□□□ -1.03
SMAD4-209ENST00000589941 CEP192Q8TEP8 1941 aa8.63□□□□□ -1.03
SMAD4-209ENST00000589941 CCL16O15467 120 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms