RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	KRT3	P12035	628 aa		16.16	■□□□□ 0.18
DDX39A-209	ENST00000589318	TKT	P29401	623 aa	Known RBP	16.16	■□□□□ 0.18
DDX39A-209	ENST00000589318	SLC7A5	Q01650	507 aa		16.16	■□□□□ 0.18
DDX39A-209	ENST00000589318	TUSC3	Q13454	348 aa		16.16	■□□□□ 0.18
DDX39A-209	ENST00000589318	CLLU1OS	Q5K130	101 aa		16.16	■□□□□ 0.18
DDX39A-209	ENST00000589318	KIAA0319	Q5VV43	1072 aa		16.16	■□□□□ 0.18
DDX39A-209	ENST00000589318	C8orf74	Q6P047	294 aa		16.16	■□□□□ 0.18
DDX39A-209	ENST00000589318	B3GALNT2	Q8NCR0	500 aa		16.16	■□□□□ 0.18
DDX39A-209	ENST00000589318	PIWIL1	Q96J94	861 aa	Known RBP	16.16	■□□□□ 0.18
DDX39A-209	ENST00000589318	KDM4C	Q9H3R0	1056 aa		16.16	■□□□□ 0.18
DDX39A-209	ENST00000589318	SYNC	Q9H7C4	482 aa		16.16	■□□□□ 0.18
DDX39A-209	ENST00000589318	METTL5	Q9NRN9	209 aa	Known RBP	16.16	■□□□□ 0.18
DDX39A-209	ENST00000589318	INPP5F	Q9Y2H2	1132 aa		16.16	■□□□□ 0.18
DDX39A-209	ENST00000589318	GOLGA6L10	A6NI86	522 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	PITPNM1	O00562	1244 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	B4GALT3	O60512	393 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	RGS7	P49802	495 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	ADCY2	Q08462	1091 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	BFSP2	Q13515	415 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	TIGD5	Q53EQ6	642 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	ANKRD20A8P	Q5CZ79	823 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	AP1AR	Q63HQ0	302 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	TMEM110	Q86TL2	294 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	KLHL7	Q8IXQ5	586 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	ANKRD52	Q8NB46	1076 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	FNIP1	Q8TF40	1166 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	STK32A	Q8WU08	396 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	DDX47	Q9H0S4	455 aa	Known RBP	16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	UST	Q9Y2C2	406 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	TCRBV7S2A1N4T	A0A589	114 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	GMNC	A6NCL1	334 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	C5orf60	A6NFR6	353 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	PIK3R2	O00459	728 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	LIN7A	O14910	233 aa	Predicted RBP	16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	RAD51C	O43502	376 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	HSPA6	P17066	643 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	ACAT1	P24752	427 aa	Known RBP	16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	RIPK1	Q13546	671 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	PIGH	Q14442	188 aa	Predicted RBP	16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	SIX1	Q15475	284 aa	Predicted RBP	16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	PLEKHG4	Q58EX7	1191 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	SEL1L2	Q5TEA6	688 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	NAIF1	Q69YI7	327 aa	Predicted RBP	16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	TTC19	Q6DKK2	380 aa	Predicted RBP	16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	FAM183BP	Q6ZVS7	135 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	ADAT2	Q7Z6V5	191 aa	Known RBP	16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	RHOT1	Q8IXI2	618 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	TMEM86A	Q8N2M4	240 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	ARFGAP1	Q8N6T3	406 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	EMC1	Q8N766	993 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	TSEN2	Q8NCE0	465 aa	Known RBP	16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	SLC2A14	Q8TDB8	520 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	TNIP3	Q96KP6	325 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	NAP1L3	Q99457	506 aa	Predicted RBP	16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	HINFP	Q9BQA5	517 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	FTHL17	Q9BXU8	183 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	CRISPLD2	Q9H0B8	497 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	RABEP2	Q9H5N1	569 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	GDF3	Q9NR23	364 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	HESX1	Q9UBX0	185 aa		16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	TPX2	Q9ULW0	747 aa	Known RBP	16.15	■□□□□ 0.18
DDX39A-209	ENST00000589318	SART1	O43290	800 aa	Known RBP	16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	GLI1	P08151	1106 aa		16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	ADORA2B	P29275	332 aa		16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	RPL34	P49207	117 aa	Known RBP	16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	ATP1A2	P50993	1020 aa		16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	BCAT1	P54687	386 aa		16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	BST2	Q10589	180 aa	Known RBP	16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	CLUL1	Q15846	466 aa		16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	TCTN1	Q2MV58	587 aa		16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	TRNP1	Q6NT89	227 aa		16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	OLFML1	Q6UWY5	402 aa		16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	PAQR9	Q6ZVX9	377 aa		16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	SLC13A5	Q86YT5	568 aa	Predicted RBP	16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	KATNAL2	Q8IYT4	538 aa		16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	DBF4B	Q8NFT6	615 aa		16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	RNF217	Q8TC41	542 aa		16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	HNRNPAB	Q99729	332 aa	Known RBP	16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	HERPUD2	Q9BSE4	406 aa		16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	TIMM13	Q9Y5L4	95 aa	Predicted RBP	16.14	■□□□□ 0.17
DDX39A-209	ENST00000589318	BHMG1	C9JSJ3	638 aa	Predicted RBP	16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318		E7EVH7	732 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	PQBP1	O60828	265 aa	Known RBP	16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	B3GAT3	O94766	335 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	ITGB1	P05556	798 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	GSTA1	P08263	222 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	PTPN1	P18031	435 aa	Known RBP	16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	GUCY1A3	Q02108	690 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	DSC1	Q08554	894 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	NAA25	Q14CX7	972 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	FAM102A	Q5T9C2	384 aa	Predicted RBP	16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	TXNRD3NB	Q6F5E7	133 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	DSTYK	Q6XUX3	929 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	ANKRD33	Q7Z3H0	272 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	PRELID2	Q8N945	189 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	KHSRP	Q92945	711 aa	Known RBP eCLIP	16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	UROC1	Q96N76	676 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	EBF2	Q9HAK2	575 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	CRTAC1	Q9NQ79	661 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	DDX43	Q9NXZ2	648 aa	Known RBP	16.13	■□□□□ 0.17

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms