RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 TMEM59LQ9UK28 342 aa32.62■■■□□ 2.81
CAPNS1-206ENST00000588815 MYO16Q9Y6X6 1858 aa32.62■■■□□ 2.81
CAPNS1-206ENST00000588815 CCDC66A2RUB6 948 aa32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 TMEM110-MUSTN1A8MSY1 372 aa32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 OR4Q2P0C623 313 aa32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 LINC00271P0C7V0 271 aa32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 LCP1P13796 627 aa32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 RFC1P35251 1148 aaPredicted RBP32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 ADIGQ0VDE8 80 aa32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 UBL4BQ8N7F7 174 aa32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 FBXO22Q8NEZ5 403 aa32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 KCNK16Q96T55 309 aa32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 TRIM7Q9C029 511 aa32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 SSX2IPQ9Y2D8 614 aa32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 HHLA1C9JL84 531 aa32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 TRIM66O15016 1216 aa32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 NCK2O43639 380 aa32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 GLI1P08151 1106 aa32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 WHAMMP3Q1A5X7 153 aa32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 CD101Q93033 1021 aa32.61■■■□□ 2.81
CAPNS1-206ENST00000588815 URODP06132 367 aa32.6■■■□□ 2.81
CAPNS1-206ENST00000588815 DESP17661 470 aa32.6■■■□□ 2.81
CAPNS1-206ENST00000588815 CTNNA2P26232 953 aa32.6■■■□□ 2.81
CAPNS1-206ENST00000588815 TKTL1P51854 596 aa32.6■■■□□ 2.81
CAPNS1-206ENST00000588815 CACNA2D1P54289 1103 aa32.6■■■□□ 2.81
CAPNS1-206ENST00000588815 CREMQ03060 361 aa32.6■■■□□ 2.81
CAPNS1-206ENST00000588815 JOSD2Q8TAC2 188 aa32.6■■■□□ 2.81
CAPNS1-206ENST00000588815 PBKQ96KB5 322 aa32.6■■■□□ 2.81
CAPNS1-206ENST00000588815 C8orf48Q96LL4 319 aa32.6■■■□□ 2.81
CAPNS1-206ENST00000588815 TMEM30AQ9NV96 361 aa32.6■■■□□ 2.81
CAPNS1-206ENST00000588815 ABI2Q9NYB9 513 aaPredicted RBP32.6■■■□□ 2.81
CAPNS1-206ENST00000588815 RNF14Q9UBS8 474 aa32.6■■■□□ 2.81
CAPNS1-206ENST00000588815 PACSIN2Q9UNF0 486 aaPredicted RBP32.6■■■□□ 2.81
CAPNS1-206ENST00000588815 PIK3R2O00459 728 aa32.59■■■□□ 2.81
CAPNS1-206ENST00000588815 GJB6O95452 261 aa32.59■■■□□ 2.81
CAPNS1-206ENST00000588815 MRPS5P82675 430 aaKnown RBP32.59■■■□□ 2.81
CAPNS1-206ENST00000588815 PRSS55Q6UWB4 352 aaPredicted RBP32.59■■■□□ 2.81
CAPNS1-206ENST00000588815 NCAPGQ9BPX3 1015 aa32.59■■■□□ 2.81
CAPNS1-206ENST00000588815 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP32.59■■■□□ 2.81
CAPNS1-206ENST00000588815 CDY1Q9Y6F8 540 aa32.59■■■□□ 2.81
CAPNS1-206ENST00000588815 PLXNA3P51805 1871 aa32.59■■■□□ 2.81
CAPNS1-206ENST00000588815 C2CD4BA6NLJ0 364 aa32.58■■■□□ 2.81
CAPNS1-206ENST00000588815 FGF18O76093 207 aa32.58■■■□□ 2.81
CAPNS1-206ENST00000588815 GPD1P21695 349 aa32.58■■■□□ 2.81
CAPNS1-206ENST00000588815 CTNNA1P35221 906 aaKnown RBP32.58■■■□□ 2.81
CAPNS1-206ENST00000588815 GRIK1P39086 918 aa32.58■■■□□ 2.81
CAPNS1-206ENST00000588815 ZNF143P52747 638 aaPredicted RBP32.58■■■□□ 2.81
CAPNS1-206ENST00000588815 IRGQQ8WZA9 623 aa32.58■■■□□ 2.81
CAPNS1-206ENST00000588815 CEP295NLQ96MC4 621 aa32.58■■■□□ 2.81
CAPNS1-206ENST00000588815 PLVAPQ9BX97 442 aa32.58■■■□□ 2.81
CAPNS1-206ENST00000588815 RHOBTB2Q9BYZ6 727 aa32.58■■■□□ 2.81
CAPNS1-206ENST00000588815 HSFX1Q9UBD0 423 aa32.58■■■□□ 2.81
CAPNS1-206ENST00000588815 SBDSQ9Y3A5 250 aaKnown RBP eCLIP32.58■■■□□ 2.81
CAPNS1-206ENST00000588815 MTMR11A4FU01 709 aa32.57■■■□□ 2.8
CAPNS1-206ENST00000588815 F8VP50 259 aa32.57■■■□□ 2.8
CAPNS1-206ENST00000588815 DPYSL4O14531 572 aa32.57■■■□□ 2.8
CAPNS1-206ENST00000588815 HSF2BPO75031 334 aa32.57■■■□□ 2.8
CAPNS1-206ENST00000588815 CYP2F1P24903 491 aa32.57■■■□□ 2.8
CAPNS1-206ENST00000588815 PSMA2P25787 234 aa32.57■■■□□ 2.8
CAPNS1-206ENST00000588815 ADCY1Q08828 1119 aa32.57■■■□□ 2.8
CAPNS1-206ENST00000588815 CNPY3Q9BT09 278 aa32.57■■■□□ 2.8
CAPNS1-206ENST00000588815 CARD9Q9H257 536 aa32.57■■■□□ 2.8
CAPNS1-206ENST00000588815 PCDHA3Q9Y5H8 950 aa32.57■■■□□ 2.8
CAPNS1-206ENST00000588815 OGDHQ02218 1023 aa32.56■■■□□ 2.8
CAPNS1-206ENST00000588815 ZNF252P-AS1Q0IIN9 211 aa32.56■■■□□ 2.8
CAPNS1-206ENST00000588815 RSPO2Q6UXX9 243 aaPredicted RBP32.56■■■□□ 2.8
CAPNS1-206ENST00000588815 VPS52Q8N1B4 723 aa32.56■■■□□ 2.8
CAPNS1-206ENST00000588815 KHSRPQ92945 711 aaKnown RBP eCLIP32.56■■■□□ 2.8
CAPNS1-206ENST00000588815 LZTS1Q9Y250 596 aa32.56■■■□□ 2.8
CAPNS1-206ENST00000588815 USP3Q9Y6I4 520 aa32.56■■■□□ 2.8
CAPNS1-206ENST00000588815 DDX3YO15523 660 aaKnown RBP32.55■■■□□ 2.8
CAPNS1-206ENST00000588815 PSTPIP1O43586 416 aa32.55■■■□□ 2.8
CAPNS1-206ENST00000588815 MAGEA10P43363 369 aaPredicted RBP32.55■■■□□ 2.8
CAPNS1-206ENST00000588815 DAOAP59103 153 aa32.55■■■□□ 2.8
CAPNS1-206ENST00000588815 TPGS2Q68CL5 300 aa32.55■■■□□ 2.8
CAPNS1-206ENST00000588815 PM20D1Q6GTS8 502 aa32.55■■■□□ 2.8
CAPNS1-206ENST00000588815 PIWIL1Q96J94 861 aaKnown RBP32.55■■■□□ 2.8
CAPNS1-206ENST00000588815 TRIM62Q9BVG3 475 aa32.55■■■□□ 2.8
CAPNS1-206ENST00000588815 MRPL17Q9NRX2 175 aaKnown RBP32.55■■■□□ 2.8
CAPNS1-206ENST00000588815 FNIP2Q9P278 1114 aa32.55■■■□□ 2.8
CAPNS1-206ENST00000588815 KCNK3O14649 394 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 RNF8O76064 485 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 ZBED1O96006 694 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 PDGFRAP16234 1089 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 BMPR1AP36894 532 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 ARPP19P56211 112 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 ROR1Q01973 937 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 CKAP4Q07065 602 aaKnown RBP32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 LRRC38Q5VT99 294 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 RHOT1Q8IXI2 618 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 EMC1Q8N766 993 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 CEP112Q8N8E3 955 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 RXFP2Q8WXD0 754 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 ULBP1Q9BZM6 244 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 MAFFQ9ULX9 164 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 COL4A4P53420 1690 aaPredicted RBP32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 OR1D2P34982 312 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 FLT3P36888 993 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 PTPN9P43378 593 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 RNASE9P60153 205 aaKnown RBP32.54■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms