RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 CD48P09326 243 aa18.38■□□□□ 0.53
ERCC2-211ENST00000588652 RDXP35241 583 aaKnown RBP18.38■□□□□ 0.53
ERCC2-211ENST00000588652 NCALDP61601 193 aa18.38■□□□□ 0.53
ERCC2-211ENST00000588652 GPS1Q13098 491 aa18.38■□□□□ 0.53
ERCC2-211ENST00000588652 ZBTB6Q15916 424 aa18.38■□□□□ 0.53
ERCC2-211ENST00000588652 PPP1R21Q6ZMI0 780 aa18.38■□□□□ 0.53
ERCC2-211ENST00000588652 BBS12Q6ZW61 710 aa18.38■□□□□ 0.53
ERCC2-211ENST00000588652 APBB1IPQ7Z5R6 666 aaPredicted RBP18.38■□□□□ 0.53
ERCC2-211ENST00000588652 TTC25Q96NG3 672 aa18.38■□□□□ 0.53
ERCC2-211ENST00000588652 CPA4Q9UI42 421 aa18.38■□□□□ 0.53
ERCC2-211ENST00000588652 SNX9Q9Y5X1 595 aa18.38■□□□□ 0.53
ERCC2-211ENST00000588652 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.38■□□□□ 0.53
ERCC2-211ENST00000588652 SMIM35A0A1B0GVV1 85 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 EXOC1LA0A1B0GW35 172 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 E5RJQ4 531 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 DYNLT1P63172 113 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 FASTKD3Q14CZ7 662 aaKnown RBP18.37■□□□□ 0.53
ERCC2-211ENST00000588652 NOTUMQ6P988 496 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 CCDC91Q7Z6B0 441 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 CMASQ8NFW8 434 aaPredicted RBP18.37■□□□□ 0.53
ERCC2-211ENST00000588652 ACTL9Q8TC94 416 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 PLCD4Q9BRC7 762 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 TUBGCP4Q9UGJ1 667 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 USP18Q9UMW8 372 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 PIK3R2O00459 728 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 ATP6V1G2O95670 118 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 CYP2C9P11712 490 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 DARSP14868 501 aaKnown RBP18.37■□□□□ 0.53
ERCC2-211ENST00000588652 ZNF143P52747 638 aaPredicted RBP18.37■□□□□ 0.53
ERCC2-211ENST00000588652 OTUD4Q01804 1114 aaKnown RBP18.37■□□□□ 0.53
ERCC2-211ENST00000588652 TAF5Q15542 800 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 PREPLQ4J6C6 727 aaPredicted RBP18.37■□□□□ 0.53
ERCC2-211ENST00000588652 MORN1Q5T089 497 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 TRABD2AQ86V40 505 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 PIWIL1Q96J94 861 aaKnown RBP18.37■□□□□ 0.53
ERCC2-211ENST00000588652 MRPL45Q9BRJ2 306 aaKnown RBP18.37■□□□□ 0.53
ERCC2-211ENST00000588652 PCDH9Q9HC56 1237 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 ASNSD1Q9NWL6 643 aa18.37■□□□□ 0.53
ERCC2-211ENST00000588652 TRIP12Q14669 1992 aaPredicted RBP18.36■□□□□ 0.53
ERCC2-211ENST00000588652 FAM47DPA6NHR8 397 aa18.36■□□□□ 0.53
ERCC2-211ENST00000588652 SGK1O00141 431 aa18.36■□□□□ 0.53
ERCC2-211ENST00000588652 TRUB2O95900 331 aaKnown RBP18.36■□□□□ 0.53
ERCC2-211ENST00000588652 TAC1P20366 129 aa18.36■□□□□ 0.53
ERCC2-211ENST00000588652 FOXN2P32314 431 aa18.36■□□□□ 0.53
ERCC2-211ENST00000588652 YARSP54577 528 aaKnown RBP18.36■□□□□ 0.53
ERCC2-211ENST00000588652 WDR4P57081 412 aaKnown RBP18.36■□□□□ 0.53
ERCC2-211ENST00000588652 NR1H3Q13133 447 aa18.36■□□□□ 0.53
ERCC2-211ENST00000588652 HIC1Q14526 733 aa18.36■□□□□ 0.53
ERCC2-211ENST00000588652 MORF4L2Q15014 288 aa18.36■□□□□ 0.53
ERCC2-211ENST00000588652 STILQ15468 1287 aa18.36■□□□□ 0.53
ERCC2-211ENST00000588652 PPP1R26Q5T8A7 1209 aaPredicted RBP18.36■□□□□ 0.53
ERCC2-211ENST00000588652 RNASEH2BQ5TBB1 312 aaKnown RBP18.36■□□□□ 0.53
ERCC2-211ENST00000588652 OLFML2BQ68BL8 750 aa18.36■□□□□ 0.53
ERCC2-211ENST00000588652 TRNP1Q6NT89 227 aa18.36■□□□□ 0.53
ERCC2-211ENST00000588652 FAM183BPQ6ZVS7 135 aa18.36■□□□□ 0.53
ERCC2-211ENST00000588652 TBC1D1Q86TI0 1168 aaPredicted RBP18.36■□□□□ 0.53
ERCC2-211ENST00000588652 TLK2Q86UE8 772 aa18.36■□□□□ 0.53
ERCC2-211ENST00000588652 TDRPQ86YL5 185 aa18.36■□□□□ 0.53
ERCC2-211ENST00000588652 TTC13Q8NBP0 860 aa18.36■□□□□ 0.53
ERCC2-211ENST00000588652 KCTD6Q8NC69 237 aa18.36■□□□□ 0.53
ERCC2-211ENST00000588652 LENG1Q96BZ8 264 aaPredicted RBP18.36■□□□□ 0.53
ERCC2-211ENST00000588652 ECT2Q9H8V3 914 aa18.36■□□□□ 0.53
ERCC2-211ENST00000588652 FLRT1Q9NZU1 646 aa18.36■□□□□ 0.53
ERCC2-211ENST00000588652 C2CD4BA6NLJ0 364 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 IFNB1P01574 187 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 PCK1P35558 622 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 BNIP1Q12981 228 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 MAP2K5Q13163 448 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 PCBP1Q15365 356 aaKnown RBP eCLIP18.35■□□□□ 0.53
ERCC2-211ENST00000588652 MTFR1Q15390 333 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 GOLGA7BQ2TAP0 167 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 GLRA4Q5JXX5 417 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 OR6B2Q6IFH4 312 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 GBP7Q8N8V2 638 aaPredicted RBP18.35■□□□□ 0.53
ERCC2-211ENST00000588652 C18orf25Q96B23 403 aaPredicted RBP18.35■□□□□ 0.53
ERCC2-211ENST00000588652 MIS12Q9H081 205 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 NXF3Q9H4D5 531 aaKnown RBP18.35■□□□□ 0.53
ERCC2-211ENST00000588652 NME7Q9Y5B8 376 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 GPD1P21695 349 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 PDE4CQ08493 712 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 IRF5Q13568 498 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 PKDCCQ504Y2 493 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 HP1BP3Q5SSJ5 553 aaPredicted RBP18.35■□□□□ 0.53
ERCC2-211ENST00000588652 WLSQ5T9L3 541 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 SH3PXD2AQ5TCZ1 1133 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 ALKAL1Q6UXT8 129 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 ACOT1Q86TX2 421 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 LRRC52Q8N7C0 313 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 BEST2Q8NFU1 509 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 HSPH1Q92598 858 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 RMDN2Q96LZ7 410 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 PEBP4Q96S96 227 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 CNPY3Q9BT09 278 aa18.35■□□□□ 0.53
ERCC2-211ENST00000588652 FRMD8P1Q9BZ68 369 aaPredicted RBP18.35■□□□□ 0.53
ERCC2-211ENST00000588652 PDCD11Q14690 1871 aaKnown RBP18.35■□□□□ 0.53
ERCC2-211ENST00000588652 RECQL4O94761 1208 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 ZNF865P0CJ78 1059 aaPredicted RBP18.34■□□□□ 0.53
ERCC2-211ENST00000588652 PDGFRAP16234 1089 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 ADAM17P78536 824 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 IL9RQ01113 521 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms