RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 PIK3R2O00459 728 aa21.48■■□□□ 1.03
ATG4D-204ENST00000586417 MYBL2P10244 700 aa21.48■■□□□ 1.03
ATG4D-204ENST00000586417 ACAT1P24752 427 aaKnown RBP21.48■■□□□ 1.03
ATG4D-204ENST00000586417 BCAT1P54687 386 aa21.48■■□□□ 1.03
ATG4D-204ENST00000586417 BST2Q10589 180 aaKnown RBP21.48■■□□□ 1.03
ATG4D-204ENST00000586417 SIX1Q15475 284 aaPredicted RBP21.48■■□□□ 1.03
ATG4D-204ENST00000586417 SPOUT1Q5T280 376 aaKnown RBP21.48■■□□□ 1.03
ATG4D-204ENST00000586417 FAM102AQ5T9C2 384 aaPredicted RBP21.48■■□□□ 1.03
ATG4D-204ENST00000586417 LRRC38Q5VT99 294 aa21.48■■□□□ 1.03
ATG4D-204ENST00000586417 DSTYKQ6XUX3 929 aa21.48■■□□□ 1.03
ATG4D-204ENST00000586417 CCNI2Q6ZMN8 369 aaPredicted RBP21.48■■□□□ 1.03
ATG4D-204ENST00000586417 HNRNPABQ99729 332 aaKnown RBP21.48■■□□□ 1.03
ATG4D-204ENST00000586417 SLITRK6Q9H5Y7 841 aa21.48■■□□□ 1.03
ATG4D-204ENST00000586417 MARCH5Q9NX47 278 aa21.48■■□□□ 1.03
ATG4D-204ENST00000586417 FAN1Q9Y2M0 1017 aa21.48■■□□□ 1.03
ATG4D-204ENST00000586417 FSCN2O14926 492 aa21.48■■□□□ 1.03
ATG4D-204ENST00000586417 ERLIN1O75477 346 aa21.48■■□□□ 1.03
ATG4D-204ENST00000586417 HEXIM1O94992 359 aaKnown RBP21.48■■□□□ 1.03
ATG4D-204ENST00000586417 LINC00271P0C7V0 271 aa21.48■■□□□ 1.03
ATG4D-204ENST00000586417 PTPN1P18031 435 aaKnown RBP21.48■■□□□ 1.03
ATG4D-204ENST00000586417 RPL34P49207 117 aaKnown RBP21.48■■□□□ 1.03
ATG4D-204ENST00000586417 OLFML1Q6UWY5 402 aa21.48■■□□□ 1.03
ATG4D-204ENST00000586417 FUKQ8N0W3 1084 aa21.48■■□□□ 1.03
ATG4D-204ENST00000586417 ARFGAP1Q8N6T3 406 aa21.48■■□□□ 1.03
ATG4D-204ENST00000586417 PRELID2Q8N945 189 aa21.48■■□□□ 1.03
ATG4D-204ENST00000586417 TMEM175Q9BSA9 504 aa21.48■■□□□ 1.03
ATG4D-204ENST00000586417 PLVAPQ9BX97 442 aa21.48■■□□□ 1.03
ATG4D-204ENST00000586417 DDX43Q9NXZ2 648 aaKnown RBP21.48■■□□□ 1.03
ATG4D-204ENST00000586417 BHMG1C9JSJ3 638 aaPredicted RBP21.47■■□□□ 1.03
ATG4D-204ENST00000586417 PSMA2P25787 234 aa21.47■■□□□ 1.03
ATG4D-204ENST00000586417 TNFRSF8P28908 595 aa21.47■■□□□ 1.03
ATG4D-204ENST00000586417 LHX1P48742 406 aa21.47■■□□□ 1.03
ATG4D-204ENST00000586417 ALDH7A1P49419 539 aaKnown RBP21.47■■□□□ 1.03
ATG4D-204ENST00000586417 OR6B2Q6IFH4 312 aa21.47■■□□□ 1.03
ATG4D-204ENST00000586417 TRNP1Q6NT89 227 aa21.47■■□□□ 1.03
ATG4D-204ENST00000586417 PAQR9Q6ZVX9 377 aa21.47■■□□□ 1.03
ATG4D-204ENST00000586417 HERPUD2Q9BSE4 406 aa21.47■■□□□ 1.03
ATG4D-204ENST00000586417 GDF3Q9NR23 364 aa21.47■■□□□ 1.03
ATG4D-204ENST00000586417 TIMM13Q9Y5L4 95 aaPredicted RBP21.47■■□□□ 1.03
ATG4D-204ENST00000586417 GOLGA6L10A0A0M3HER8 536 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 ZSCAN5CA6NGD5 496 aaPredicted RBP21.46■■□□□ 1.03
ATG4D-204ENST00000586417 PAPSS1O43252 624 aaPredicted RBP21.46■■□□□ 1.03
ATG4D-204ENST00000586417 KCNT2Q6UVM3 1135 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 FIBCD1Q8N539 461 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 EXD1Q8NHP7 514 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 SP7Q8TDD2 431 aaPredicted RBP21.46■■□□□ 1.03
ATG4D-204ENST00000586417 PLEKHA4Q9H4M7 779 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 CRTAC1Q9NQ79 661 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 AMACRQ9UHK6 382 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 ADAM28Q9UKQ2 775 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 VWA8A3KMH1 1905 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 TMEM189-UBE2V1I3L0A0 370 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 LRCH4O75427 683 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 TADA2AO75478 443 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 ARHGEF15O94989 841 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 RARAP10276 462 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 SSR1P43307 286 aaKnown RBP21.46■■□□□ 1.03
ATG4D-204ENST00000586417 PPP2R5EQ16537 467 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 CYP1B1Q16678 543 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 ATP13A4Q4VNC1 1196 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 TXNRD3NBQ6F5E7 133 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 SPRED2Q7Z698 418 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 COLGALT1Q8NBJ5 622 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 KHSRPQ92945 711 aaKnown RBP eCLIP21.46■■□□□ 1.03
ATG4D-204ENST00000586417 GPR62Q9BZJ7 368 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 CYLDQ9NQC7 956 aa21.46■■□□□ 1.03
ATG4D-204ENST00000586417 C2CD4BA6NLJ0 364 aa21.45■■□□□ 1.02
ATG4D-204ENST00000586417 M0QZQ0 153 aa21.45■■□□□ 1.02
ATG4D-204ENST00000586417 PHF2O75151 1096 aa21.45■■□□□ 1.02
ATG4D-204ENST00000586417 CYP11A1P05108 521 aa21.45■■□□□ 1.02
ATG4D-204ENST00000586417 ODC1P11926 461 aa21.45■■□□□ 1.02
ATG4D-204ENST00000586417 PAX3P23760 479 aa21.45■■□□□ 1.02
ATG4D-204ENST00000586417 GJC1P36383 396 aa21.45■■□□□ 1.02
ATG4D-204ENST00000586417 PLA2G4AP47712 749 aa21.45■■□□□ 1.02
ATG4D-204ENST00000586417 GUCY2DQ02846 1103 aa21.45■■□□□ 1.02
ATG4D-204ENST00000586417 SLC25A11Q02978 314 aaKnown RBP21.45■■□□□ 1.02
ATG4D-204ENST00000586417 ANKS1BQ7Z6G8 1248 aa21.45■■□□□ 1.02
ATG4D-204ENST00000586417 GSPT2Q8IYD1 628 aaKnown RBP21.45■■□□□ 1.02
ATG4D-204ENST00000586417 SPATA18Q8TC71 538 aa21.45■■□□□ 1.02
ATG4D-204ENST00000586417 RTP3Q9BQQ7 232 aa21.45■■□□□ 1.02
ATG4D-204ENST00000586417 SYT15Q9BQS2 421 aa21.45■■□□□ 1.02
ATG4D-204ENST00000586417 COLEC11Q9BWP8 271 aa21.45■■□□□ 1.02
ATG4D-204ENST00000586417 CLDN5O00501 218 aa21.44■■□□□ 1.02
ATG4D-204ENST00000586417 FLT3P36888 993 aa21.44■■□□□ 1.02
ATG4D-204ENST00000586417 ZNF143P52747 638 aaPredicted RBP21.44■■□□□ 1.02
ATG4D-204ENST00000586417 SLC6A3Q01959 620 aa21.44■■□□□ 1.02
ATG4D-204ENST00000586417 LLGL1Q15334 1064 aa21.44■■□□□ 1.02
ATG4D-204ENST00000586417 MDH1BQ5I0G3 518 aa21.44■■□□□ 1.02
ATG4D-204ENST00000586417 POLNQ7Z5Q5 900 aa21.44■■□□□ 1.02
ATG4D-204ENST00000586417 ZDHHC17Q8IUH5 632 aa21.44■■□□□ 1.02
ATG4D-204ENST00000586417 SCUBE3Q8IX30 993 aa21.44■■□□□ 1.02
ATG4D-204ENST00000586417 SUSD3Q96L08 255 aa21.44■■□□□ 1.02
ATG4D-204ENST00000586417 HSFY1Q96LI6 401 aa21.44■■□□□ 1.02
ATG4D-204ENST00000586417 ZNF558Q96NG5 402 aa21.44■■□□□ 1.02
ATG4D-204ENST00000586417 DUSP16Q9BY84 665 aa21.44■■□□□ 1.02
ATG4D-204ENST00000586417 FUT8Q9BYC5 575 aa21.44■■□□□ 1.02
ATG4D-204ENST00000586417 B3GNT5Q9BYG0 378 aa21.44■■□□□ 1.02
ATG4D-204ENST00000586417 EPB41L5Q9HCM4 733 aa21.44■■□□□ 1.02
ATG4D-204ENST00000586417 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.44■■□□□ 1.02
ATG4D-204ENST00000586417 NLRC5Q86WI3 1866 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms