RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 PRMT9Q6P2P2 845 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 APOBEC3FQ8IUX4 373 aaKnown RBP13.49□□□□□ -0.25
RNF43-208ENST00000584437 GDPD5Q8WTR4 605 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 BTN2A2Q8WVV5 523 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 PI4K2AQ9BTU6 479 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 JMJD4Q9H9V9 463 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 KCND1Q9NSA2 647 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 KIAA1257Q9ULG3 409 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 TBX20Q9UMR3 447 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 TAF6LQ9Y6J9 622 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 CYP11B1P15538 503 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 PCSK1P29120 753 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 RGS2P41220 211 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 PKN2Q16513 984 aaKnown RBP13.49□□□□□ -0.25
RNF43-208ENST00000584437 TRIM71Q2Q1W2 868 aaKnown RBP13.49□□□□□ -0.25
RNF43-208ENST00000584437 TTLL9Q3SXZ7 439 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 CYP4A22Q5TCH4 519 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 MOXD1Q6UVY6 613 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 SP8Q8IXZ3 490 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 ZCCHC7Q8N3Z6 543 aaKnown RBP13.49□□□□□ -0.25
RNF43-208ENST00000584437 ZNF483Q8TF39 744 aaPredicted RBP13.49□□□□□ -0.25
RNF43-208ENST00000584437 OSCP1Q8WVF1 389 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 PCDH9Q9HC56 1237 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 CHORDC1Q9UHD1 332 aaPredicted RBP13.49□□□□□ -0.25
RNF43-208ENST00000584437 PAX7P23759 505 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 PPP3CCP48454 512 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 PRKAA2P54646 552 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 HPCAP84074 193 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 NCF4Q15080 339 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 FUT11Q495W5 492 aa13.49□□□□□ -0.25
RNF43-208ENST00000584437 TRMT6Q9UJA5 497 aaKnown RBP13.49□□□□□ -0.25
RNF43-208ENST00000584437 F8W810 466 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 FCHO1O14526 889 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 AP5Z1O43299 807 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 RRM2P31350 389 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 PRIM2P49643 509 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 GPR162Q16538 588 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 IER5Q5VY09 327 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 IL25Q9H293 177 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 GDF3Q9NR23 364 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 SLC38A7Q9NVC3 462 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.48□□□□□ -0.25
RNF43-208ENST00000584437 PRR12Q9ULL5 1215 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 DAGLAQ9Y4D2 1042 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 RAD54BQ9Y620 910 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 MROH7Q68CQ1 1323 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 POLR1AO95602 1720 aaPredicted RBP13.48□□□□□ -0.25
RNF43-208ENST00000584437 ASNA1O43681 348 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 NR3C2P08235 984 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 CACNB2Q08289 660 aaPredicted RBP13.48□□□□□ -0.25
RNF43-208ENST00000584437 SNX17Q15036 470 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 SPOCD1Q6ZMY3 1216 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 TLK2Q86UE8 772 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 SVOPQ8N4V2 548 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 TEX13BQ9BXU2 312 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 PAIP1Q9H074 479 aaKnown RBP13.48□□□□□ -0.25
RNF43-208ENST00000584437 FAM49BQ9NUQ9 324 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 ATAD3AQ9NVI7 634 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 MYRFQ9Y2G1 1151 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 MAP2K7O14733 419 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 GNL1P36915 607 aaPredicted RBP13.48□□□□□ -0.25
RNF43-208ENST00000584437 C16orf72Q14CZ0 275 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 TBCELQ5QJ74 424 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 IL31Q6EBC2 164 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 CRELD2Q6UXH1 353 aaPredicted RBP13.48□□□□□ -0.25
RNF43-208ENST00000584437 ZNF571Q7Z3V5 609 aaPredicted RBP13.48□□□□□ -0.25
RNF43-208ENST00000584437 TDRD5Q8NAT2 981 aaKnown RBP13.48□□□□□ -0.25
RNF43-208ENST00000584437 CENPTQ96BT3 561 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 MIEF2Q96C03 454 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 ZNF184Q99676 751 aaPredicted RBP13.48□□□□□ -0.25
RNF43-208ENST00000584437 NMRK1Q9NWW6 199 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 CROCC2H7BZ55 1655 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 USP31Q70CQ4 1352 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 PDGFRBP09619 1106 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 TXNP10599 105 aaKnown RBP13.48□□□□□ -0.25
RNF43-208ENST00000584437 TROAPQ12815 778 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 SGO1Q5FBB7 561 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 FAXCQ5TGI0 409 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 UBA3Q8TBC4 463 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 OXNAD1Q96HP4 312 aaPredicted RBP13.48□□□□□ -0.25
RNF43-208ENST00000584437 SH2D3AQ9BRG2 576 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 KCTD10Q9H3F6 313 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 IQGAP3Q86VI3 1631 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 E9PBE3 544 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 KLHL41O60662 606 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 MYBPC2Q14324 1141 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 SEMA6BQ9H3T3 888 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 VTI1BQ9UEU0 232 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 TMCC3Q9ULS5 477 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 DRG1Q9Y295 367 aaKnown RBP13.48□□□□□ -0.25
RNF43-208ENST00000584437 ACOT9Q9Y305 439 aa13.48□□□□□ -0.25
RNF43-208ENST00000584437 SASH3O75995 380 aa13.47□□□□□ -0.25
RNF43-208ENST00000584437 MED26O95402 600 aa13.47□□□□□ -0.25
RNF43-208ENST00000584437 SERPINE1P05121 402 aa13.47□□□□□ -0.25
RNF43-208ENST00000584437 SOAT1P35610 550 aa13.47□□□□□ -0.25
RNF43-208ENST00000584437 ANXA11P50995 505 aaKnown RBP13.47□□□□□ -0.25
RNF43-208ENST00000584437 ELF3P78545 371 aaPredicted RBP13.47□□□□□ -0.25
RNF43-208ENST00000584437 ILF2Q12905 390 aaKnown RBP13.47□□□□□ -0.25
RNF43-208ENST00000584437 CLEC16AQ2KHT3 1053 aa13.47□□□□□ -0.25
RNF43-208ENST00000584437 PREPLQ4J6C6 727 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms