RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 CFHP08603 1231 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 CD58P19256 250 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 NOP2P46087 812 aaKnown RBP12.63□□□□□ -0.39
GGA3-217ENST00000583667 CDH8P55286 799 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 SOX4Q06945 474 aaPredicted RBP12.63□□□□□ -0.39
GGA3-217ENST00000583667 RARS2Q5T160 578 aaKnown RBP12.63□□□□□ -0.39
GGA3-217ENST00000583667 KIAA1841Q6NSI8 718 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 C11orf63Q6NUN7 778 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 MON1BQ7L1V2 547 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 ZNF572Q7Z3I7 529 aaPredicted RBP12.63□□□□□ -0.39
GGA3-217ENST00000583667 ECHDC2Q86YB7 292 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 TOP6BLQ8N6T0 577 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 TFAP2BQ92481 460 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 ARHGEF26Q96DR7 871 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 ADAM2Q99965 735 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 APOL6Q9BWW8 343 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 NT5C1AQ9BXI3 368 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 ELOVL4Q9GZR5 314 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 ELAC1Q9H777 363 aaKnown RBP12.63□□□□□ -0.39
GGA3-217ENST00000583667 SMYD3Q9H7B4 428 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 TBC1D17Q9HA65 648 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 NGRNQ9NPE2 291 aaKnown RBP12.63□□□□□ -0.39
GGA3-217ENST00000583667 KLK14Q9P0G3 267 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 LCMT1Q9UIC8 334 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 USP18Q9UMW8 372 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 LZTS1Q9Y250 596 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 SIT1Q9Y3P8 196 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 HYOU1Q9Y4L1 999 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 GCN1Q92616 2671 aaKnown RBP12.63□□□□□ -0.39
GGA3-217ENST00000583667 ARL5CA6NH57 179 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 EFCAB8A8MWE9 144 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 TMCO5BA8MYB1 307 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 SLC30A4O14863 429 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 PROS1P07225 676 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 ABCB4P21439 1286 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 NSFP46459 744 aaKnown RBP12.62□□□□□ -0.39
GGA3-217ENST00000583667 AARSP49588 968 aaKnown RBP eCLIP12.62□□□□□ -0.39
GGA3-217ENST00000583667 NAP1L1P55209 391 aaKnown RBP12.62□□□□□ -0.39
GGA3-217ENST00000583667 GSCP56915 257 aaPredicted RBP12.62□□□□□ -0.39
GGA3-217ENST00000583667 LILRA4P59901 499 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 SOWAHAQ2M3V2 549 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 LIN9Q5TKA1 542 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 ARHGAP17Q68EM7 881 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 PLEKHA7Q6IQ23 1121 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 LCLAT1Q6UWP7 414 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 WDTC1Q8N5D0 677 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 COLGALT1Q8NBJ5 622 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 ACSF2Q96CM8 615 aaPredicted RBP12.62□□□□□ -0.39
GGA3-217ENST00000583667 HES6Q96HZ4 224 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 UROC1Q96N76 676 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 GAD1Q99259 594 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 PDCL3Q9H2J4 239 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 RSAD1Q9HA92 442 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 MRPL47Q9HD33 250 aaKnown RBP12.62□□□□□ -0.39
GGA3-217ENST00000583667 PARD6AQ9NPB6 346 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 ENTPD7Q9NQZ7 604 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 HCSTQ9UBK5 93 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 SNX9Q9Y5X1 595 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 CEP295Q9C0D2 2601 aa12.62□□□□□ -0.39
GGA3-217ENST00000583667 O00370 1275 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 DYNC1I1O14576 645 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 ENC1O14682 589 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 PPEF2O14830 753 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 SPTLC1O15269 473 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 BUB1BO60566 1050 aaPredicted RBP12.61□□□□□ -0.39
GGA3-217ENST00000583667 CALB1P05937 261 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 SETSIPP0DME0 302 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 GLULP15104 373 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 WARSP23381 471 aaKnown RBP12.61□□□□□ -0.39
GGA3-217ENST00000583667 PMLP29590 882 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 NDST1P52848 882 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 PLCB3Q01970 1234 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 GRIK3Q13003 919 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 RPS6KA1Q15418 735 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 ZNF528Q3MIS6 628 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 GLRA4Q5JXX5 417 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 NAA35Q5VZE5 725 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 NT5DC3Q86UY8 548 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 CREG2Q8IUH2 290 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 MNS1Q8NEH6 495 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 FEZF2Q8TBJ5 459 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 STK32AQ8WU08 396 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 PBKQ96KB5 322 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 ZFP42Q96MM3 310 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 TWNKQ96RR1 684 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 OSBPL9Q96SU4 736 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 MMS19Q96T76 1030 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 OSGEPQ9NPF4 335 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 MIOSQ9NXC5 875 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 ADAM22Q9P0K1 906 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 CTTNBP2NLQ9P2B4 639 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 CNOT8Q9UFF9 292 aaKnown RBP12.61□□□□□ -0.39
GGA3-217ENST00000583667 PUF60Q9UHX1 559 aaKnown RBP12.61□□□□□ -0.39
GGA3-217ENST00000583667 CA14Q9ULX7 337 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.61□□□□□ -0.39
GGA3-217ENST00000583667 CEP83Q9Y592 693 aa12.61□□□□□ -0.39
GGA3-217ENST00000583667 CACNA1IQ9P0X4 2223 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 TCRBV5S1A1TA0A578 114 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 MEIS3P2A8K0S8 358 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 MIF4GDA9UHW6 222 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms