RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 FOXD4L3Q6VB84 417 aaPredicted RBP4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 PRR23BQ6ZRT6 265 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 UNC13DQ70J99 1090 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 SYT13Q7L8C5 426 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 DPH6Q7L8W6 267 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 FILIP1Q7Z7B0 1213 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 SCD5Q86SK9 330 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 METTL23Q86XA0 190 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 SCN4BQ8IWT1 228 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 DCP1BQ8IZD4 617 aaKnown RBP4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 THEM5Q8N1Q8 247 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 SYNPOQ8N3V7 929 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 C12orf29Q8N999 325 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 IL17RCQ8NAC3 791 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 MDGA1Q8NFP4 955 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 RPLP0P6Q8NHW5 317 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 SPATA18Q8TC71 538 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 FAM200AQ8TCP9 573 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 CSGALNACT1Q8TDX6 532 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 SEMA4DQ92854 862 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 CCDC127Q96BQ5 260 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 PAGE5Q96GU1 130 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 MSANTD3Q96H12 275 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 ZNF560Q96MR9 790 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 ACOX2Q99424 681 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 P2RY13Q9BPV8 354 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 ZSWIM1Q9BR11 485 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 CCSER2Q9H7U1 834 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 TMEM206Q9H813 350 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 NMUR1Q9HB89 426 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 CSNK1G1Q9HCP0 422 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 TMEM74BQ9NUR3 256 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 DUS2Q9NX74 493 aaKnown RBP4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 SMPD4Q9NXE4 827 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 CCDC39Q9UFE4 941 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 EBF1Q9UH73 591 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 RALYQ9UKM9 306 aaKnown RBP4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 CDH9Q9ULB4 789 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 CLEC4EQ9ULY5 219 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 KIF3AQ9Y496 699 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 PCDHB13Q9Y5F0 798 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 CPQQ9Y646 472 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 SLCO1B1Q9Y6L6 691 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 KNL1Q8NG31 2342 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 MUC22E2RYF6 1773 aaPredicted RBP4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 PI4KAP42356 2102 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 WDFY3Q8IZQ1 3526 aa4.75□□□□□ -1.65
PPP4R1-209ENST00000578329 THADAQ6YHU6 1953 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 ADAMTS9Q9P2N4 1935 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 A0A1W2PQF6 199 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 LNP1A1A4G5 178 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 BCLAF3A2AJT9 711 aaKnown RBP4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 PRRT4C9JH25 899 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 GFRA2O00451 464 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 MDM4O15151 490 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 HUS1O60921 280 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 LRP3O75074 770 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 RPP40O75818 363 aaKnown RBP4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 AKAP3O75969 853 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 LDHAP00338 332 aaKnown RBP4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 ASS1P00966 412 aaKnown RBP4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 USP17L7P0C7H9 530 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 CISD3P0C7P0 127 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 DLATP10515 647 aaKnown RBP4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 CCDC130P13994 396 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 HDCP19113 662 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 PDCP20941 246 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 DDX6P26196 483 aaKnown RBP eCLIP4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 CNR2P34972 360 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 GNL1P36915 607 aaPredicted RBP4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 AVPR1AP37288 418 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 PTGER3P43115 390 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 AFMP43652 599 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 LHX1P48742 406 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 LIMK1P53667 647 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 RPL10AP62906 217 aaKnown RBP4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 ASIC1P78348 528 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 TSPY1Q01534 308 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 LMNB2Q03252 620 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 ALCAMQ13740 583 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 LRRC32Q14392 662 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 NUMA1Q14980 2115 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 VEPH1Q14D04 833 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 PDGFRLQ15198 375 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 STK38Q15208 465 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 DHCR24Q15392 516 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 KNOP1Q1ED39 458 aaKnown RBP4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 WDR72Q3MJ13 1102 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 KMT5BQ4FZB7 885 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 ARHGAP15Q53QZ3 475 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 PPM1JQ5JR12 505 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 LY6G5CQ5SRR4 150 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 PMS2CLQ68D20 193 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 KIAA1211LQ6NV74 962 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 VSTM1Q6UX27 236 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 Q6ZNB5 142 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 DENND5BQ6ZUT9 1274 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 TOGARAM2Q6ZUX3 1019 aa4.74□□□□□ -1.65
PPP4R1-209ENST00000578329 SV2AQ7L0J3 742 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms