RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 C2orf78A6NCI8 922 aa11.96□□□□□ -0.49
SMARCE1-214ENST00000578112 PPP6R2O75170 966 aa11.96□□□□□ -0.49
SMARCE1-214ENST00000578112 GNL1P36915 607 aaPredicted RBP11.96□□□□□ -0.49
SMARCE1-214ENST00000578112 PXNP49023 591 aaPredicted RBP11.96□□□□□ -0.49
SMARCE1-214ENST00000578112 NASPP49321 788 aaPredicted RBP11.96□□□□□ -0.49
SMARCE1-214ENST00000578112 TNNC1P63316 161 aa11.96□□□□□ -0.49
SMARCE1-214ENST00000578112 ZNF252P-AS1Q0IIN9 211 aa11.96□□□□□ -0.49
SMARCE1-214ENST00000578112 BMT2Q1RMZ1 405 aa11.96□□□□□ -0.49
SMARCE1-214ENST00000578112 SDHAF4Q5VUM1 108 aa11.96□□□□□ -0.49
SMARCE1-214ENST00000578112 PSAPL1Q6NUJ1 521 aa11.96□□□□□ -0.49
SMARCE1-214ENST00000578112 UNQ6494/PRO21346Q6UXR6 183 aa11.96□□□□□ -0.49
SMARCE1-214ENST00000578112 TRAPPC11Q7Z392 1133 aa11.96□□□□□ -0.49
SMARCE1-214ENST00000578112 NUP93Q8N1F7 819 aa11.96□□□□□ -0.49
SMARCE1-214ENST00000578112 PCED1BQ96HM7 432 aa11.96□□□□□ -0.49
SMARCE1-214ENST00000578112 STARD13Q9Y3M8 1113 aa11.96□□□□□ -0.49
SMARCE1-214ENST00000578112 KMT2BQ9UMN6 2715 aaPredicted RBP11.96□□□□□ -0.5
SMARCE1-214ENST00000578112 FAM221BA6H8Z2 402 aa11.96□□□□□ -0.5
SMARCE1-214ENST00000578112 C4orf47A7E2U8 309 aa11.96□□□□□ -0.5
SMARCE1-214ENST00000578112 ADH5P11766 374 aa11.96□□□□□ -0.5
SMARCE1-214ENST00000578112 IDEP14735 1019 aa11.96□□□□□ -0.5
SMARCE1-214ENST00000578112 TRIM21P19474 475 aaKnown RBP11.96□□□□□ -0.5
SMARCE1-214ENST00000578112 GBP1P32455 592 aa11.96□□□□□ -0.5
SMARCE1-214ENST00000578112 KCNA1Q09470 495 aa11.96□□□□□ -0.5
SMARCE1-214ENST00000578112 FILIP1Q7Z7B0 1213 aa11.96□□□□□ -0.5
SMARCE1-214ENST00000578112 CFAP54Q96N23 3096 aa11.96□□□□□ -0.5
SMARCE1-214ENST00000578112 FNBP1Q96RU3 617 aa11.96□□□□□ -0.5
SMARCE1-214ENST00000578112 DNAI2Q9GZS0 605 aa11.96□□□□□ -0.5
SMARCE1-214ENST00000578112 KBTBD4Q9NVX7 518 aa11.96□□□□□ -0.5
SMARCE1-214ENST00000578112 NUP205Q92621 2012 aa11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 NPC1O15118 1278 aa11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 AP5Z1O43299 807 aa11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 ZNF217O75362 1048 aa11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 KAT7O95251 611 aa11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 PTPN1P18031 435 aaKnown RBP11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 BDNFP23560 247 aa11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 YWHAQP27348 245 aa11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 KIR2DL1P43626 348 aaPredicted RBP11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 CASP5P51878 434 aa11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 ZNF132P52740 706 aa11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 ENPEPQ07075 957 aa11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 BTBD8Q5XKL5 378 aa11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 PHTF2Q8N3S3 785 aa11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 ZNF276Q8N554 614 aa11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 TAF4BQ92750 862 aa11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 TNIP3Q96KP6 325 aa11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 CYP2S1Q96SQ9 504 aa11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 CPQQ9Y646 472 aa11.95□□□□□ -0.5
SMARCE1-214ENST00000578112 GFRA2O00451 464 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 ZBTB24O43167 697 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 ZDHHC11BP0C7U3 371 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 CYP27A1Q02318 531 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 DUOXA1Q1HG43 343 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 MAP7D1Q3KQU3 841 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 LYSMD4Q5XG99 296 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 HS2ST1Q7LGA3 356 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 MDGA1Q8NFP4 955 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 C7orf25Q9BPX7 421 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 ADAM33Q9BZ11 813 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 LINC00597Q9H2U6 94 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 MARK1Q9P0L2 795 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 VPS37CA5D8V6 355 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 GOLGA8IPA6NC78 632 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 GOLGA8JA6NMD2 632 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 CDX4O14627 284 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 MBL2P11226 248 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 CYP24A1Q07973 514 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 SLC14A1Q13336 389 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 SNRNP35Q16560 246 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 HECTD3Q5T447 861 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 SH3PXD2AQ5TCZ1 1133 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 USP49Q70CQ1 688 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 PIP4P1Q86T03 277 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 ETFBKMTQ8IXQ9 262 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 IL17RCQ8NAC3 791 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 XXYLT1Q8NBI6 393 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 OR5B17Q8NGF7 314 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 TMEM121BQ9BXQ6 578 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 FBXO44Q9H4M3 255 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 ARHGEF4Q9NR80 690 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 SLC6A14Q9UN76 642 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 NFE2L3Q9Y4A8 694 aa11.94□□□□□ -0.5
SMARCE1-214ENST00000578112 PVALEFA0A1B0GWK0 134 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 KLF8O95600 359 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 P4HA1P13674 534 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 LMO2P25791 158 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 DHPSP49366 369 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 CLDN10P78369 228 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 GOLGA8FQ08AF8 430 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 GOLGA8DPQ0D2H9 430 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 TAF10Q12962 218 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 TRPC3Q13507 836 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 MDH1BQ5I0G3 518 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 RHBDF2Q6PJF5 856 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 UNC13DQ70J99 1090 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 METTL3Q86U44 580 aaKnown RBP11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 B3GALNT2Q8NCR0 500 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 SMARCD1Q96GM5 515 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 ZNF396Q96N95 335 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 MMS19Q96T76 1030 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 TRIM9Q9C026 710 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms