RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 NAV2Q8IVL1 2488 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 GOLGA8IPA6NC78 632 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 TMEM8BA6NDV4 472 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 CASTOR2A6NHX0 329 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 GOLGA8JA6NMD2 632 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 F8VZ95 297 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 TSPAN1O60635 241 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 PRKCBP05771 671 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 CHRNB1P11230 501 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 TNNI1P19237 187 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 GDI1P31150 447 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 ARHGAP25P42331 645 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 NOVA1P51513 510 aaKnown RBP14.91□□□□□ -0.02
SREBF1-217ENST00000577897 RING1Q06587 406 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 CKAP4Q07065 602 aaKnown RBP14.91□□□□□ -0.02
SREBF1-217ENST00000577897 NCBP1Q09161 790 aaKnown RBP14.91□□□□□ -0.02
SREBF1-217ENST00000577897 GRIK3Q13003 919 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 CAPSQ13938 189 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 DRAP1Q14919 205 aaPredicted RBP14.91□□□□□ -0.02
SREBF1-217ENST00000577897 WHAMMP3Q1A5X7 153 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 ASTE1Q2TB18 679 aaPredicted RBP14.91□□□□□ -0.02
SREBF1-217ENST00000577897 NOTUMQ6P988 496 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 POTEHQ6S545 545 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 CBWD2Q8IUF1 395 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 HACE1Q8IYU2 909 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 SLC35F6Q8N357 371 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 SPEM1Q8N4L4 309 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 IRF7Q92985 503 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 IMPG2Q9BZV3 1241 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 ZFP14Q9HCL3 533 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 SIX2Q9NPC8 291 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 RBM12Q9NTZ6 932 aaKnown RBP14.91□□□□□ -0.02
SREBF1-217ENST00000577897 PARP2Q9UGN5 583 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 CDC23Q9UJX2 597 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 COQ4Q9Y3A0 265 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 JRKLQ9Y4A0 524 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 NOTCH4Q99466 2003 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 COL4A2P08572 1712 aa14.91□□□□□ -0.02
SREBF1-217ENST00000577897 A0A0B4J269 797 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 BTNL10A8MVZ5 291 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 EFCAB8A8MWE9 144 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 K7ESF4 209 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 KIF4AO95239 1232 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 POU2F2P09086 479 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 ZNF806P0C7X5 589 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 TNFAIP3P21580 790 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 FCARP24071 287 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 OR1D2P34982 312 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 BPIFB4P59827 614 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 POU5F1Q01860 360 aaKnown RBP14.9□□□□□ -0.02
SREBF1-217ENST00000577897 CYP27A1Q02318 531 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 PCBP1Q15365 356 aaKnown RBP eCLIP14.9□□□□□ -0.027e-11■■■■□ 19.9
SREBF1-217ENST00000577897 NAB2Q15742 525 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 IRF2BP2Q7Z5L9 587 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 GSTCDQ8NEC7 633 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 UBXN4Q92575 508 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 WDR24Q96S15 920 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 IKZF4Q9H2S9 585 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 ZNF334Q9HCZ1 680 aaPredicted RBP14.9□□□□□ -0.02
SREBF1-217ENST00000577897 UBE2TQ9NPD8 197 aaPredicted RBP14.9□□□□□ -0.02
SREBF1-217ENST00000577897 RAB20Q9NX57 234 aa14.9□□□□□ -0.02
SREBF1-217ENST00000577897 RBAKQ9NYW8 714 aaPredicted RBP14.9□□□□□ -0.02
SREBF1-217ENST00000577897 REXO2Q9Y3B8 237 aaKnown RBP14.9□□□□□ -0.02
SREBF1-217ENST00000577897 IGSF10Q6WRI0 2623 aa14.89□□□□□ -0.03
SREBF1-217ENST00000577897 SRRM3A6NNA2 597 aaPredicted RBP14.89□□□□□ -0.03
SREBF1-217ENST00000577897 LRRIQ3A6PVS8 624 aaPredicted RBP14.89□□□□□ -0.03
SREBF1-217ENST00000577897 INO80B-WBP1J3KQ70 363 aa14.89□□□□□ -0.03
SREBF1-217ENST00000577897 ACKR2O00590 384 aa14.89□□□□□ -0.03
SREBF1-217ENST00000577897 PLEKP08567 350 aaPredicted RBP14.89□□□□□ -0.03
SREBF1-217ENST00000577897 DLATP10515 647 aaKnown RBP14.89□□□□□ -0.03
SREBF1-217ENST00000577897 AXLP30530 894 aa14.89□□□□□ -0.03
SREBF1-217ENST00000577897 HOXC13P31276 330 aa14.89□□□□□ -0.03
SREBF1-217ENST00000577897 GFPT1Q06210 699 aaPredicted RBP14.89□□□□□ -0.03
SREBF1-217ENST00000577897 PPP3CAQ08209 521 aa14.89□□□□□ -0.03
SREBF1-217ENST00000577897 ZNF252P-AS1Q0IIN9 211 aa14.89□□□□□ -0.03
SREBF1-217ENST00000577897 PRPF4BQ13523 1007 aaKnown RBP14.89□□□□□ -0.03
SREBF1-217ENST00000577897 LRRC32Q14392 662 aa14.89□□□□□ -0.03
SREBF1-217ENST00000577897 FAM78AQ5JUQ0 283 aa14.89□□□□□ -0.03
SREBF1-217ENST00000577897 RNF43Q68DV7 783 aa14.89□□□□□ -0.03
SREBF1-217ENST00000577897 PPP1R2P3Q6NXS1 205 aa14.89□□□□□ -0.03
SREBF1-217ENST00000577897 SLC39A4Q6P5W5 647 aa14.89□□□□□ -0.03
SREBF1-217ENST00000577897 Q6ZS52 159 aa14.89□□□□□ -0.03
SREBF1-217ENST00000577897 CDR2LQ86X02 465 aaPredicted RBP14.89□□□□□ -0.03
SREBF1-217ENST00000577897 TARS2Q9BW92 718 aaKnown RBP14.89□□□□□ -0.03
SREBF1-217ENST00000577897 ADAM33Q9BZ11 813 aa14.89□□□□□ -0.03
SREBF1-217ENST00000577897 ANKFY1Q9P2R3 1169 aa14.89□□□□□ -0.03
SREBF1-217ENST00000577897 ADAMTS1Q9UHI8 967 aa14.89□□□□□ -0.03
SREBF1-217ENST00000577897 MRFAP1Q9Y605 127 aa14.89□□□□□ -0.03
SREBF1-217ENST00000577897 SPAG17Q6Q759 2223 aa14.88□□□□□ -0.03
SREBF1-217ENST00000577897 MACROD2A1Z1Q3 448 aa14.88□□□□□ -0.03
SREBF1-217ENST00000577897 TISP43B9A030 160 aa14.88□□□□□ -0.03
SREBF1-217ENST00000577897 NRG2O14511 850 aaPredicted RBP14.88□□□□□ -0.03
SREBF1-217ENST00000577897 GIPC1O14908 333 aa14.88□□□□□ -0.03
SREBF1-217ENST00000577897 OGTO15294 1046 aa14.88□□□□□ -0.03
SREBF1-217ENST00000577897 PHACTR2O75167 634 aa14.88□□□□□ -0.03
SREBF1-217ENST00000577897 IL18RAPO95256 599 aa14.88□□□□□ -0.03
SREBF1-217ENST00000577897 NPTXRO95502 500 aa14.88□□□□□ -0.03
SREBF1-217ENST00000577897 TUBBP07437 444 aa14.88□□□□□ -0.03
SREBF1-217ENST00000577897 ADRB2P07550 413 aa14.88□□□□□ -0.03
SREBF1-217ENST00000577897 H2AFZP0C0S5 128 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms