RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 TFAP2BQ92481 460 aa13.07□□□□□ -0.32
RARA-208ENST00000577646 MRPS31Q92665 395 aaKnown RBP13.07□□□□□ -0.32
RARA-208ENST00000577646 SYN2Q92777 582 aaPredicted RBP13.07□□□□□ -0.32
RARA-208ENST00000577646 NOX5Q96PH1 765 aa13.07□□□□□ -0.32
RARA-208ENST00000577646 KCNK16Q96T55 309 aa13.07□□□□□ -0.32
RARA-208ENST00000577646 CD320Q9NPF0 282 aa13.07□□□□□ -0.32
RARA-208ENST00000577646 TRPM5Q9NZQ8 1165 aa13.07□□□□□ -0.32
RARA-208ENST00000577646 CEP83Q9Y592 693 aa13.07□□□□□ -0.32
RARA-208ENST00000577646 USP3Q9Y6I4 520 aa13.07□□□□□ -0.32
RARA-208ENST00000577646 PTPRDP23468 1912 aa13.07□□□□□ -0.32
RARA-208ENST00000577646 C5orf42Q9H799 3197 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 THAP12O43422 761 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 SOAT2O75908 522 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 LSM8O95777 96 aaKnown RBP13.06□□□□□ -0.32
RARA-208ENST00000577646 MYL4P12829 197 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 LAMP2P13473 410 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 CYP11B1P15538 503 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 GABRR2P28476 465 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 HOXD11P31277 338 aaPredicted RBP13.06□□□□□ -0.32
RARA-208ENST00000577646 RPL34P49207 117 aaKnown RBP13.06□□□□□ -0.32
RARA-208ENST00000577646 TUBP50607 506 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 KIF11P52732 1056 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 APBA1Q02410 837 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 CCDC142Q17RM4 750 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 GOLGA7BQ2TAP0 167 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 RAB41Q5JT25 222 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 SPECC1LQ69YQ0 1117 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 TRIM72Q6ZMU5 477 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 MTSS1LQ765P7 747 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 CCDC186Q7Z3E2 898 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 MON1AQ86VX9 555 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 TTC30AQ86WT1 665 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 KIAA1958Q8N8K9 716 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 TDRD5Q8NAT2 981 aaKnown RBP13.06□□□□□ -0.32
RARA-208ENST00000577646 STKLD1Q8NE28 680 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 CDK5RAP1Q96SZ6 601 aaKnown RBP13.06□□□□□ -0.32
RARA-208ENST00000577646 XPO4Q9C0E2 1151 aaKnown RBP13.06□□□□□ -0.32
RARA-208ENST00000577646 MIS12Q9H081 205 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 ATXN3LQ9H3M9 355 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 TASP1Q9H6P5 420 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 TRPV4Q9HBA0 871 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 IL21Q9HBE4 155 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 NLRC4Q9NPP4 1024 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 HCFC1R1Q9NWW0 138 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 AIPL1Q9NZN9 384 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 IGSF9Q9P2J2 1179 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 SCML2Q9UQR0 700 aa13.06□□□□□ -0.32
RARA-208ENST00000577646 BZW2Q9Y6E2 419 aaKnown RBP13.06□□□□□ -0.32
RARA-208ENST00000577646 HHLA1C9JL84 531 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 PI4K2BG5E9Z4 385 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 SART1O43290 800 aaKnown RBP13.05□□□□□ -0.32
RARA-208ENST00000577646 BEST1O76090 585 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 FBXO21O94952 628 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 TPM1P09493 284 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 BRD2P25440 801 aaKnown RBP13.05□□□□□ -0.32
RARA-208ENST00000577646 GBP2P32456 591 aaPredicted RBP13.05□□□□□ -0.32
RARA-208ENST00000577646 GPD2P43304 727 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 KLK7P49862 253 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 SLC5A3P53794 718 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 CACNA2D1P54289 1103 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 PDE4CQ08493 712 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 PM20D1Q6GTS8 502 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 GAREM2Q75VX8 874 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 TADA2BQ86TJ2 420 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 PIGZQ86VD9 579 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 DRC7Q8IY82 874 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 HS6ST3Q8IZP7 471 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 TMEM35BQ8NCS4 154 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 MSANTD4Q8NCY6 345 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 IRGQQ8WZA9 623 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 FGF13Q92913 245 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 TRIM62Q9BVG3 475 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 TTYH3Q9C0H2 523 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 RBSNQ9H1K0 784 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 EPHX3Q9H6B9 360 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 LRRC4Q9HBW1 653 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 CNGB3Q9NQW8 809 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 TLR8Q9NR97 1041 aaKnown RBP13.05□□□□□ -0.32
RARA-208ENST00000577646 TMEM30AQ9NV96 361 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 TMEM51Q9NW97 253 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 OBP2AQ9NY56 170 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 CAPN11Q9UMQ6 739 aa13.05□□□□□ -0.32
RARA-208ENST00000577646 MAGED2Q9UNF1 606 aaPredicted RBP13.05□□□□□ -0.32
RARA-208ENST00000577646 LUC7L2Q9Y383 392 aaKnown RBP13.05□□□□□ -0.32
RARA-208ENST00000577646 M0QYV0 167 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 EPHB6O15197 1021 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 DCXO43602 365 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 MOSPD3O75425 235 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 ZDHHC11BP0C7U3 371 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 CDH5P33151 784 aaPredicted RBP13.04□□□□□ -0.32
RARA-208ENST00000577646 GPR15P49685 360 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 NTHL1P78549 312 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 ZBED6P86452 979 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 CDR2Q01850 454 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 TAF10Q12962 218 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 ZNF268Q14587 947 aaPredicted RBP13.04□□□□□ -0.32
RARA-208ENST00000577646 TMEM31Q5JXX7 168 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 TMEM110Q86TL2 294 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 SLC47A2Q86VL8 602 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 NPAS3Q8IXF0 933 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms