RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ZNF334Q9HCZ1 680 aaPredicted RBP11.67□□□□□ -0.54
CHD3-216ENST00000573936 SIX2Q9NPC8 291 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 KRT82Q9NSB4 513 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 LIMD1Q9UGP4 676 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 DNAJC12Q9UKB3 198 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 RNF225M0QZC1 329 aaPredicted RBP11.66□□□□□ -0.54
CHD3-216ENST00000573936 MOSPD3O75425 235 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 SERPINC1P01008 464 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 NPR3P17342 541 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 YWHAQP27348 245 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 CCR2P41597 374 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 ZNF132P52740 706 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 BCAT1P54687 386 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 BPIFB4P59827 614 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 TEAD2Q15562 447 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 CNGA2Q16280 664 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 GJB7Q6PEY0 223 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 CLEC20AQ6ZU45 233 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 GAREM2Q75VX8 874 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 LUZP1Q86V48 1076 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 PDZD8Q8NEN9 1154 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 SHKBP1Q8TBC3 707 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 ING5Q8WYH8 240 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 OVCA2Q8WZ82 227 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 SHC3Q92529 594 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 NKD2Q969F2 451 aaPredicted RBP11.66□□□□□ -0.54
CHD3-216ENST00000573936 E2F7Q96AV8 911 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 PCMTD1Q96MG8 357 aaPredicted RBP11.66□□□□□ -0.54
CHD3-216ENST00000573936 SLITRK1Q96PX8 696 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 ERGIC2Q96RQ1 377 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 KCNK16Q96T55 309 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 SLITRK6Q9H5Y7 841 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 IL21Q9HBE4 155 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 TRPM5Q9NZQ8 1165 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 C2orf16Q68DN1 1984 aa11.66□□□□□ -0.54
CHD3-216ENST00000573936 RIF1Q5UIP0 2472 aaKnown RBP11.66□□□□□ -0.54
CHD3-216ENST00000573936 ANHXE9PGG2 379 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 TNFRSF10BO14763 440 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 SETSIPP0DME0 302 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 ATP1A3P13637 1013 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 UCHL3P15374 230 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 GJA1P17302 382 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 PFKLP17858 780 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 WEE1P30291 646 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 USP8P40818 1118 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 PDE6CP51160 858 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 SLC5A3P53794 718 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 CACNA2D1P54289 1103 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 PTK2Q05397 1052 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 BST2Q10589 180 aaKnown RBP11.65□□□□□ -0.54
CHD3-216ENST00000573936 RAPGEF1Q13905 1077 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 GOLGA7BQ2TAP0 167 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 GPR158Q5T848 1215 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 ASTLQ6HA08 431 aaPredicted RBP11.65□□□□□ -0.54
CHD3-216ENST00000573936 LCLAT1Q6UWP7 414 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 ASCL5Q7RTU5 278 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 APTXQ7Z2E3 356 aaKnown RBP11.65□□□□□ -0.54
CHD3-216ENST00000573936 ERMP1Q7Z2K6 904 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 ZMIZ2Q8NF64 920 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 NEK11Q8NG66 645 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 FBXO32Q969P5 355 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 STK33Q9BYT3 514 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 TASP1Q9H6P5 420 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 RTN4Q9NQC3 1192 aaKnown RBP11.65□□□□□ -0.54
CHD3-216ENST00000573936 IL37Q9NZH6 218 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 TSPAN16Q9UKR8 245 aa11.65□□□□□ -0.54
CHD3-216ENST00000573936 PRR23AA6NEV1 266 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 O00370 1275 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 FOXN3O00409 490 aaPredicted RBP11.64□□□□□ -0.55
CHD3-216ENST00000573936 XPO1O14980 1071 aaKnown RBP11.64□□□□□ -0.55
CHD3-216ENST00000573936 ECI2O75521 394 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 BEST1O76090 585 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 GNA15P30679 374 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 NBL1P41271 181 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 ID4P47928 161 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 CYP4F8P98187 520 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 APBA1Q02410 837 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 TDGQ13569 410 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 DRAP1Q14919 205 aaPredicted RBP11.64□□□□□ -0.55
CHD3-216ENST00000573936 SYCP1Q15431 976 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 MEA1Q16626 185 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 DPY19L2P1Q6NXN4 242 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 MON1AQ86VX9 555 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 GAS2L3Q86XJ1 694 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 STKLD1Q8NE28 680 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 ZSCAN18Q8TBC5 510 aaPredicted RBP11.64□□□□□ -0.55
CHD3-216ENST00000573936 SMARCD2Q92925 531 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 ELSPBP1Q96BH3 223 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 ASB16Q96NS5 453 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 NAA15Q9BXJ9 866 aaKnown RBP11.64□□□□□ -0.55
CHD3-216ENST00000573936 KCNK12Q9HB15 430 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 TRPV4Q9HBA0 871 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 ZFP14Q9HCL3 533 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 TMEM30AQ9NV96 361 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 OBP2AQ9NY56 170 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.64□□□□□ -0.55
CHD3-216ENST00000573936 SIK3Q9Y2K2 1263 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 FHOD1Q9Y613 1164 aa11.64□□□□□ -0.55
CHD3-216ENST00000573936 NCANO14594 1321 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 A0A1B0GTH6 734 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms