RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 C12orf29Q8N999 325 aa26.71■■□□□ 1.87
FANCA-228ENST00000567943 CHFRQ96EP1 664 aa26.71■■□□□ 1.87
FANCA-228ENST00000567943 KIF9Q9HAQ2 790 aa26.71■■□□□ 1.87
FANCA-228ENST00000567943 RIF1Q5UIP0 2472 aaKnown RBP26.71■■□□□ 1.87
FANCA-228ENST00000567943 TRAV19A0A0A6YYK7 116 aa26.7■■□□□ 1.86
FANCA-228ENST00000567943 ZNF840PA6NDX5 716 aa26.7■■□□□ 1.86
FANCA-228ENST00000567943 SPECC1L-ADORA2AF8WAN1 911 aa26.7■■□□□ 1.86
FANCA-228ENST00000567943 TNFRSF10BO14763 440 aa26.7■■□□□ 1.86
FANCA-228ENST00000567943 SP9P0CG40 484 aa26.7■■□□□ 1.86
FANCA-228ENST00000567943 CHRNB1P11230 501 aa26.7■■□□□ 1.86
FANCA-228ENST00000567943 CD58P19256 250 aa26.7■■□□□ 1.86
FANCA-228ENST00000567943 KPNA1P52294 538 aaPredicted RBP26.7■■□□□ 1.86
FANCA-228ENST00000567943 ZMIZ2Q8NF64 920 aa26.7■■□□□ 1.86
FANCA-228ENST00000567943 WHAMMQ8TF30 809 aa26.7■■□□□ 1.86
FANCA-228ENST00000567943 SRRTQ9BXP5 876 aaKnown RBP26.7■■□□□ 1.86
FANCA-228ENST00000567943 C8orf33Q9H7E9 229 aaPredicted RBP26.7■■□□□ 1.86
FANCA-228ENST00000567943 SPATA6Q9NWH7 488 aaPredicted RBP26.7■■□□□ 1.86
FANCA-228ENST00000567943 COQ4Q9Y3A0 265 aa26.7■■□□□ 1.86
FANCA-228ENST00000567943 ATP8B3O60423 1300 aa26.69■■□□□ 1.86
FANCA-228ENST00000567943 NCAM2O15394 837 aa26.69■■□□□ 1.86
FANCA-228ENST00000567943 BEST1O76090 585 aa26.69■■□□□ 1.86
FANCA-228ENST00000567943 USP17L7P0C7H9 530 aa26.69■■□□□ 1.86
FANCA-228ENST00000567943 MAGEA9P43362 315 aa26.69■■□□□ 1.86
FANCA-228ENST00000567943 TAF10Q12962 218 aa26.69■■□□□ 1.86
FANCA-228ENST00000567943 ZNF77Q15935 545 aa26.69■■□□□ 1.86
FANCA-228ENST00000567943 ASCL5Q7RTU5 278 aa26.69■■□□□ 1.86
FANCA-228ENST00000567943 NUP93Q8N1F7 819 aa26.69■■□□□ 1.86
FANCA-228ENST00000567943 SMOQ99835 787 aa26.69■■□□□ 1.86
FANCA-228ENST00000567943 EBF3Q9H4W6 596 aa26.69■■□□□ 1.86
FANCA-228ENST00000567943 LMAN1LQ9HAT1 526 aa26.69■■□□□ 1.86
FANCA-228ENST00000567943 THG1LQ9NWX6 298 aaKnown RBP26.69■■□□□ 1.86
FANCA-228ENST00000567943 IL37Q9NZH6 218 aa26.69■■□□□ 1.86
FANCA-228ENST00000567943 CKMP06732 381 aa26.68■■□□□ 1.86
FANCA-228ENST00000567943 HDCP19113 662 aa26.68■■□□□ 1.86
FANCA-228ENST00000567943 FMO5P49326 533 aa26.68■■□□□ 1.86
FANCA-228ENST00000567943 USP4Q13107 963 aa26.68■■□□□ 1.86
FANCA-228ENST00000567943 MTAPQ13126 283 aa26.68■■□□□ 1.86
FANCA-228ENST00000567943 RALGPS2Q86X27 583 aaPredicted RBP26.68■■□□□ 1.86
FANCA-228ENST00000567943 SCAMP5Q8TAC9 235 aa26.68■■□□□ 1.86
FANCA-228ENST00000567943 SLC2A14Q8TDB8 520 aa26.68■■□□□ 1.86
FANCA-228ENST00000567943 TATDN2Q93075 761 aa26.68■■□□□ 1.86
FANCA-228ENST00000567943 SMARCD1Q96GM5 515 aa26.68■■□□□ 1.86
FANCA-228ENST00000567943 MSANTD3Q96H12 275 aa26.68■■□□□ 1.86
FANCA-228ENST00000567943 NT5C1AQ9BXI3 368 aa26.68■■□□□ 1.86
FANCA-228ENST00000567943 RNF38Q9H0F5 515 aa26.68■■□□□ 1.86
FANCA-228ENST00000567943 CHRDQ9H2X0 955 aa26.68■■□□□ 1.86
FANCA-228ENST00000567943 KRT82Q9NSB4 513 aa26.68■■□□□ 1.86
FANCA-228ENST00000567943 FAM49BQ9NUQ9 324 aa26.68■■□□□ 1.86
FANCA-228ENST00000567943 TRPM5Q9NZQ8 1165 aa26.68■■□□□ 1.86
FANCA-228ENST00000567943 RWDD2AQ9UIY3 292 aa26.68■■□□□ 1.86
FANCA-228ENST00000567943 CILPO75339 1184 aa26.67■■□□□ 1.86
FANCA-228ENST00000567943 GNA14O95837 355 aa26.67■■□□□ 1.86
FANCA-228ENST00000567943 ARSAP15289 507 aa26.67■■□□□ 1.86
FANCA-228ENST00000567943 TRIM21P19474 475 aaKnown RBP26.67■■□□□ 1.86
FANCA-228ENST00000567943 GAS6Q14393 721 aa26.67■■□□□ 1.86
FANCA-228ENST00000567943 MTF1Q14872 753 aa26.67■■□□□ 1.86
FANCA-228ENST00000567943 ITPRIPL2Q3MIP1 535 aa26.67■■□□□ 1.86
FANCA-228ENST00000567943 MLKLQ8NB16 471 aa26.67■■□□□ 1.86
FANCA-228ENST00000567943 FAXDC2Q96IV6 333 aa26.67■■□□□ 1.86
FANCA-228ENST00000567943 CSNK1G1Q9HCP0 422 aa26.67■■□□□ 1.86
FANCA-228ENST00000567943 EHD2Q9NZN4 543 aa26.67■■□□□ 1.86
FANCA-228ENST00000567943 ARHGAP26Q9UNA1 814 aa26.67■■□□□ 1.86
FANCA-228ENST00000567943 GOLGA6L22H0YM25 854 aa26.66■■□□□ 1.86
FANCA-228ENST00000567943 GFRA3O60609 400 aa26.66■■□□□ 1.86
FANCA-228ENST00000567943 AP1G2O75843 785 aa26.66■■□□□ 1.86
FANCA-228ENST00000567943 OLFM2O95897 454 aa26.66■■□□□ 1.86
FANCA-228ENST00000567943 IFRD2Q12894 506 aaPredicted RBP26.66■■□□□ 1.86
FANCA-228ENST00000567943 RUNX3Q13761 415 aa26.66■■□□□ 1.86
FANCA-228ENST00000567943 SH3RF2Q8TEC5 729 aa26.66■■□□□ 1.86
FANCA-228ENST00000567943 ARID3AQ99856 593 aa26.66■■□□□ 1.86
FANCA-228ENST00000567943 DMAP1Q9NPF5 467 aaPredicted RBP26.66■■□□□ 1.86
FANCA-228ENST00000567943 RBM12Q9NTZ6 932 aaKnown RBP26.66■■□□□ 1.86
FANCA-228ENST00000567943 R4GN57 208 aa26.66■■□□□ 1.86
FANCA-228ENST00000567943 PRR23AA6NEV1 266 aa26.65■■□□□ 1.86
FANCA-228ENST00000567943 LAMTOR5O43504 91 aa26.65■■□□□ 1.86
FANCA-228ENST00000567943 FGFR1OPO95684 399 aaKnown RBP26.65■■□□□ 1.86
FANCA-228ENST00000567943 OAS1P00973 400 aaKnown RBP26.65■■□□□ 1.86
FANCA-228ENST00000567943 TCF3P15923 654 aa26.65■■□□□ 1.86
FANCA-228ENST00000567943 YWHAQP27348 245 aa26.65■■□□□ 1.86
FANCA-228ENST00000567943 SLC5A3P53794 718 aa26.65■■□□□ 1.86
FANCA-228ENST00000567943 ZNF394Q53GI3 561 aa26.65■■□□□ 1.86
FANCA-228ENST00000567943 TRIM59Q8IWR1 403 aa26.65■■□□□ 1.86
FANCA-228ENST00000567943 GPT2Q8TD30 523 aa26.65■■□□□ 1.86
FANCA-228ENST00000567943 MED15Q96RN5 788 aa26.65■■□□□ 1.86
FANCA-228ENST00000567943 CISHQ9NSE2 258 aa26.65■■□□□ 1.86
FANCA-228ENST00000567943 FBXO4Q9UKT5 387 aa26.65■■□□□ 1.86
FANCA-228ENST00000567943 FAM186AA6NE01 2351 aa26.65■■□□□ 1.86
FANCA-228ENST00000567943 FAM92AA1XBS5 289 aa26.64■■□□□ 1.86
FANCA-228ENST00000567943 PFKLP17858 780 aa26.64■■□□□ 1.86
FANCA-228ENST00000567943 ADORA2BP29275 332 aa26.64■■□□□ 1.86
FANCA-228ENST00000567943 PPP3CCP48454 512 aa26.64■■□□□ 1.86
FANCA-228ENST00000567943 PGFP49763 221 aa26.64■■□□□ 1.86
FANCA-228ENST00000567943 MARSP56192 900 aaKnown RBP26.64■■□□□ 1.86
FANCA-228ENST00000567943 LRMPQ12912 555 aa26.64■■□□□ 1.86
FANCA-228ENST00000567943 PON2Q15165 354 aa26.64■■□□□ 1.86
FANCA-228ENST00000567943 C1orf228Q6PIY5 440 aa26.64■■□□□ 1.86
FANCA-228ENST00000567943 MAMSTRQ6ZN01 415 aa26.64■■□□□ 1.86
FANCA-228ENST00000567943 OSCP1Q8WVF1 389 aa26.64■■□□□ 1.86
FANCA-228ENST00000567943 SLITRK1Q96PX8 696 aa26.64■■□□□ 1.86
FANCA-228ENST00000567943 HNRNPABQ99729 332 aaKnown RBP26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms