RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 CCDC127Q96BQ5 260 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 CNOT6LQ96LI5 555 aaKnown RBP17.6■□□□□ 0.41
TSR3-202ENST00000566296 ZNF396Q96N95 335 aaPredicted RBP17.6■□□□□ 0.41
TSR3-202ENST00000566296 TPSD1Q9BZJ3 242 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 SMPD4Q9NXE4 827 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 CPQQ9Y646 472 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 ATP8B3O60423 1300 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 TM4SF5O14894 197 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 ALDH1A2O94788 518 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 CYP17A1P05093 508 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 FAM163BP0C2L3 166 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 PMLP29590 882 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 SNRPFP62306 86 aaKnown RBP17.59■□□□□ 0.41
TSR3-202ENST00000566296 CYP24A1Q07973 514 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 IFRD2Q12894 506 aaPredicted RBP17.59■□□□□ 0.41
TSR3-202ENST00000566296 TAF10Q12962 218 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 E2F4Q16254 413 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 WDR72Q3MJ13 1102 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 C2orf27AQ580R0 203 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 N4BP2L1Q5TBK1 243 aaPredicted RBP17.59■□□□□ 0.41
TSR3-202ENST00000566296 PMS2CLQ68D20 193 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 TCEAL6Q6IPX3 200 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 XXYLT1Q8NBI6 393 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 ZNF507Q8TCN5 953 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 TCEAL3Q969E4 200 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 MAGEF1Q9HAY2 307 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 MMP17Q9ULZ9 603 aa17.59■□□□□ 0.41
TSR3-202ENST00000566296 KMT2BQ9UMN6 2715 aaPredicted RBP17.58■□□□□ 0.41
TSR3-202ENST00000566296 BCLAF3A2AJT9 711 aaKnown RBP17.58■□□□□ 0.4
TSR3-202ENST00000566296 A8MXQ7 604 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 CLIC2O15247 247 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 OLFM2O95897 454 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 ADH1CP00326 375 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 F13A1P00488 732 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 APODP05090 189 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 MBL2P11226 248 aaPredicted RBP17.58■□□□□ 0.4
TSR3-202ENST00000566296 PTPN1P18031 435 aaKnown RBP17.58■□□□□ 0.4
TSR3-202ENST00000566296 HOXD13P35453 343 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 MRPS21P82921 87 aaKnown RBP17.58■□□□□ 0.4
TSR3-202ENST00000566296 PKP1Q13835 747 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 DHCR24Q15392 516 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 CNNM4Q6P4Q7 775 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 UNC13DQ70J99 1090 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 EPM2AIP1Q7L775 607 aaPredicted RBP17.58■□□□□ 0.4
TSR3-202ENST00000566296 CYP2U1Q7Z449 544 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 RASSF3Q86WH2 238 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 TTC30AQ86WT1 665 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 NELFCDQ8IXH7 590 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 CCDC33Q8N5R6 958 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 PDZD8Q8NEN9 1154 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 SYAP1Q96A49 352 aaPredicted RBP17.58■□□□□ 0.4
TSR3-202ENST00000566296 LSM14BQ9BX40 385 aaKnown RBP17.58■□□□□ 0.4
TSR3-202ENST00000566296 ZNF518BQ9C0D4 1074 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 CFAP97Q9P2B7 532 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 MYOFQ9NZM1 2061 aa17.58■□□□□ 0.4
TSR3-202ENST00000566296 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.57■□□□□ 0.4
TSR3-202ENST00000566296 K7EQS6 105 aa17.57■□□□□ 0.4
TSR3-202ENST00000566296 TGFB1I1O43294 461 aa17.57■□□□□ 0.4
TSR3-202ENST00000566296 PHACTR2O75167 634 aa17.57■□□□□ 0.4
TSR3-202ENST00000566296 RTN3O95197 1032 aaPredicted RBP17.57■□□□□ 0.4
TSR3-202ENST00000566296 KCNK5O95279 499 aa17.57■□□□□ 0.4
TSR3-202ENST00000566296 YEATS4O95619 227 aa17.57■□□□□ 0.4
TSR3-202ENST00000566296 STAU1O95793 577 aaKnown RBP17.57■□□□□ 0.4
TSR3-202ENST00000566296 OAS1P00973 400 aaKnown RBP17.57■□□□□ 0.4
TSR3-202ENST00000566296 CST3P01034 146 aaPredicted RBP17.57■□□□□ 0.4
TSR3-202ENST00000566296 EIF2DP41214 584 aaKnown RBP17.57■□□□□ 0.4
TSR3-202ENST00000566296 ZXDBP98169 803 aa17.57■□□□□ 0.4
TSR3-202ENST00000566296 GAB4Q2WGN9 574 aa17.57■□□□□ 0.4
TSR3-202ENST00000566296 HSF5Q4G112 596 aaPredicted RBP17.57■□□□□ 0.4
TSR3-202ENST00000566296 DAB2IPQ5VWQ8 1189 aa17.57■□□□□ 0.4
TSR3-202ENST00000566296 B3GALNT2Q8NCR0 500 aa17.57■□□□□ 0.4
TSR3-202ENST00000566296 FBXO32Q969P5 355 aa17.57■□□□□ 0.4
TSR3-202ENST00000566296 SPACA7Q96KW9 195 aa17.57■□□□□ 0.4
TSR3-202ENST00000566296 PNKPQ96T60 521 aa17.57■□□□□ 0.4
TSR3-202ENST00000566296 DPEP3Q9H4B8 488 aa17.57■□□□□ 0.4
TSR3-202ENST00000566296 CGNQ9P2M7 1197 aaKnown RBP17.57■□□□□ 0.4
TSR3-202ENST00000566296 NXF1Q9UBU9 619 aaKnown RBP17.57■□□□□ 0.4
TSR3-202ENST00000566296 INVSQ9Y283 1065 aa17.57■□□□□ 0.4
TSR3-202ENST00000566296 NME7Q9Y5B8 376 aa17.57■□□□□ 0.4
TSR3-202ENST00000566296 MYO18AQ92614 2054 aaKnown RBP17.56■□□□□ 0.4
TSR3-202ENST00000566296 SCAMP3O14828 347 aaKnown RBP17.56■□□□□ 0.4
TSR3-202ENST00000566296 CUTAO60888 179 aa17.56■□□□□ 0.4
TSR3-202ENST00000566296 ADH5P11766 374 aa17.56■□□□□ 0.4
TSR3-202ENST00000566296 YWHAQP27348 245 aa17.56■□□□□ 0.4
TSR3-202ENST00000566296 ATICP31939 592 aa17.56■□□□□ 0.4
TSR3-202ENST00000566296 SHC2P98077 582 aa17.56■□□□□ 0.4
TSR3-202ENST00000566296 BIRC3Q13489 604 aa17.56■□□□□ 0.4
TSR3-202ENST00000566296 CRY1Q16526 586 aa17.56■□□□□ 0.4
TSR3-202ENST00000566296 PSAPL1Q6NUJ1 521 aa17.56■□□□□ 0.4
TSR3-202ENST00000566296 NUP93Q8N1F7 819 aa17.56■□□□□ 0.4
TSR3-202ENST00000566296 MDGA1Q8NFP4 955 aa17.56■□□□□ 0.4
TSR3-202ENST00000566296 SCFD1Q8WVM8 642 aa17.56■□□□□ 0.4
TSR3-202ENST00000566296 OVCA2Q8WZ82 227 aa17.56■□□□□ 0.4
TSR3-202ENST00000566296 C7orf25Q9BPX7 421 aa17.56■□□□□ 0.4
TSR3-202ENST00000566296 RNF38Q9H0F5 515 aa17.56■□□□□ 0.4
TSR3-202ENST00000566296 POLMQ9NP87 494 aaPredicted RBP17.56■□□□□ 0.4
TSR3-202ENST00000566296 CHMP5Q9NZZ3 219 aa17.56■□□□□ 0.4
TSR3-202ENST00000566296 TBC1D14Q9P2M4 693 aa17.56■□□□□ 0.4
TSR3-202ENST00000566296 MYH10P35580 1976 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 LNP1A1A4G5 178 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms