RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 DUX4L2P0CJ85 424 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 DUX4L3P0CJ86 424 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 DUX4L4P0CJ87 422 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 DUX4L5P0CJ88 424 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 DUX4L6P0CJ89 424 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 DUX4L7P0CJ90 424 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 FBXW10Q5XX13 1052 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 GFM2Q969S9 779 aaKnown RBP14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 OPTNQ96CV9 577 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 FAM111AQ96PZ2 611 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 ILKAPQ9H0C8 392 aaPredicted RBP14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 SENP2Q9HC62 589 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 DUX4Q9UBX2 424 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 UBE2Q2LH0YL09 131 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 DPEP1P16444 411 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 FXR2P51116 673 aaKnown RBP eCLIP14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 OXCT1P55809 520 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 CCZ1BP86790 482 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 CCZ1P86791 482 aaPredicted RBP14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 ANKS6Q68DC2 871 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 VN1R5Q7Z5H4 357 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 FGD2Q7Z6J4 655 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 PHACTR4Q8IZ21 702 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 RIBC1Q8N443 379 aaPredicted RBP14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 ZIM3Q96PE6 472 aa14.09□□□□□ -0.15
CX3CL1-204ENST00000565912 A0A1W2PQJ5 194 aa14.08□□□□□ -0.15
CX3CL1-204ENST00000565912 RNASEH1O60930 286 aaKnown RBP14.08□□□□□ -0.15
CX3CL1-204ENST00000565912 NME5P56597 212 aa14.08□□□□□ -0.15
CX3CL1-204ENST00000565912 OVGP1Q12889 678 aa14.08□□□□□ -0.15
CX3CL1-204ENST00000565912 CSTF3Q12996 717 aaKnown RBP14.08□□□□□ -0.15
CX3CL1-204ENST00000565912 CYP51A1Q16850 503 aa14.08□□□□□ -0.15
CX3CL1-204ENST00000565912 DAB2IPQ5VWQ8 1189 aa14.08□□□□□ -0.15
CX3CL1-204ENST00000565912 UNC45BQ8IWX7 931 aa14.08□□□□□ -0.15
CX3CL1-204ENST00000565912 ANKS1AQ92625 1134 aa14.08□□□□□ -0.15
CX3CL1-204ENST00000565912 EPB41L4AQ9HCS5 686 aaPredicted RBP14.08□□□□□ -0.15
CX3CL1-204ENST00000565912 AGPAT3Q9NRZ7 376 aa14.08□□□□□ -0.15
CX3CL1-204ENST00000565912 H0YC42 278 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 CYB561D2O14569 222 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 USP1O94782 785 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 GYS1P13807 737 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 GUCA1AP43080 201 aaPredicted RBP14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 ZC3H11AO75152 810 aaKnown RBP eCLIP14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 CYP11B2P19099 503 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 PGS1Q32NB8 556 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 DDI1Q8WTU0 396 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 DNAJC9Q8WXX5 260 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 KCNB2Q92953 911 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 MTMR12Q9C0I1 747 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 RERGLQ9H628 205 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 CNTNAP5Q8WYK1 1306 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 AGLP35573 1532 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 MSH4O15457 936 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 TFE3P19532 575 aaPredicted RBP14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 COPAP53621 1224 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 KCNT1Q5JUK3 1230 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 ZNF333Q96JL9 665 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 ISCUQ9H1K1 167 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 CAAP1Q9H8G2 361 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 KRT84Q9NSB2 600 aa14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 AAR2Q9Y312 384 aaKnown RBP14.08□□□□□ -0.16
CX3CL1-204ENST00000565912 SGPL1O95470 568 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 STIP1P31948 543 aaKnown RBP14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 ANXA11P50995 505 aaKnown RBP14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 CLCN3P51790 818 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 STX5Q13190 355 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 DNAJC3Q13217 504 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 ZNF284Q2VY69 593 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 C2CD6Q53TS8 623 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 TTC33Q6PID6 262 aaPredicted RBP14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 MYO1HQ8N1T3 1032 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 TC2NQ8N9U0 490 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 RDM1Q8NG50 284 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 RUSC1Q9BVN2 902 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 DCDC2CA8MYV0 355 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 EGFRP00533 1210 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 VCLP18206 1134 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 MUTP22033 750 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 SERPINB5P36952 375 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 SFSWAPQ12872 951 aaKnown RBP14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 CTXN3Q4LDR2 81 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 HASPINQ8TF76 798 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 CNBD2Q96M20 576 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 GPRC5CQ9NQ84 441 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 IARS2Q9NSE4 1012 aaKnown RBP14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 GPATCH2LQ9NWQ4 482 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 CPSF4O95639 269 aaKnown RBP14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 HPGDP15428 266 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 WEE1P30291 646 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 GLRBP48167 497 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 GTF2A2P52657 109 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 EFEMP1Q12805 493 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 SLC13A5Q86YT5 568 aaPredicted RBP14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 FBXO28Q9NVF7 368 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 RPS6KB2Q9UBS0 482 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 VPS28Q9UK41 221 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 TFR2Q9UP52 801 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 OGTO15294 1046 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 DYRK3O43781 588 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 GYPCP04921 128 aa14.07□□□□□ -0.16
CX3CL1-204ENST00000565912 PSMA4P25789 261 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms