RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 IDH3AP50213 366 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 MRPS15P82914 257 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 STK4Q13043 487 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 MPP2Q14168 576 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 GALNT3Q14435 633 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 SQLEQ14534 574 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ZNF792Q3KQV3 632 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 C5orf22Q49AR2 442 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 STXBP5Q5T5C0 1151 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 CREB3L3Q68CJ9 461 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ACAD10Q6JQN1 1059 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 TRMT2AQ8IZ69 625 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 SYCE1Q8N0S2 351 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 CCDC63Q8NA47 563 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 C3orf58Q8NDZ4 430 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 LINS1Q8NG48 757 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 MIPOL1Q8TD10 442 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 STYXQ8WUJ0 223 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 CACTINQ8WUQ7 758 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 KCNE4Q8WWG9 221 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 JADE3Q92613 823 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 RAB24Q969Q5 203 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 PPP1R14BQ96C90 147 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 CHAMP1Q96JM3 812 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 MRGPRX2Q96LB1 330 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 PLIN2Q99541 437 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 HEPHQ9BQS7 1158 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 TMEM120AQ9BXJ8 343 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 NOL6Q9H6R4 1146 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 TRPV4Q9HBA0 871 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 CYP4F12Q9HCS2 524 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 PLSCR4Q9NRQ2 329 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ZSCAN32Q9NX65 697 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 DNAJB9Q9UBS3 223 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 COG5Q9UP83 839 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 R3HDM2Q9Y2K5 976 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 USP3Q9Y6I4 520 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 GPR25O00155 361 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ZNF263O14978 683 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 PRPF4O43172 522 aaKnown RBP eCLIP3.24□□□□□ -1.89
CHD9-216ENST00000565803 EXOC3O60645 756 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 APOL3O95236 402 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 GSNP06396 782 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ZBTB48P10074 688 aaPredicted RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 EDN3P14138 238 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ZNF24P17028 368 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 CYP11B2P19099 503 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ALDH4A1P30038 563 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 GPC1P35052 558 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ETV1P50549 477 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 SLC12A3P55017 1021 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 NME5P56597 212 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ST5P78524 1137 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ALDH6A1Q02252 535 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 RUNX1T1Q06455 604 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ADAM15Q13444 863 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 PTK6Q13882 451 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 IKBKEQ14164 716 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 SUZ12Q15022 739 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 KRT71Q3SY84 523 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 KBTBD12Q3ZCT8 623 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 MCMDC2Q4G0Z9 681 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 TOR1AIP1Q5JTV8 583 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 TRAPPC3LQ5T215 181 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 RPUSD3Q6P087 351 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 DHX32Q7L7V1 743 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 PHLDB2Q86SQ0 1253 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 SETD6Q8TBK2 473 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 TEKT4Q8WW24 435 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 KISS1RQ969F8 398 aaPredicted RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 MIEF2Q96C03 454 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ADAD1Q96M93 576 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 NUP88Q99567 741 aaPredicted RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 HTATIP2Q9BUP3 242 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 SLC5A7Q9GZV3 580 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 PHAXQ9H814 394 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 MBIPQ9NS73 344 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.24□□□□□ -1.892e-6■□□□□ 8.1
CHD9-216ENST00000565803 SLC12A7Q9Y666 1083 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 COL15A1P39059 1388 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 RPAP1Q9BWH6 1393 aaPredicted RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 COL4A3Q01955 1670 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 TCRBV16S1A1N1A0A5B0 115 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 TNPO2O14787 897 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 KRT86O43790 486 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 EXTL3O43909 919 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 DNAJB6O75190 326 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 ATP5HO75947 161 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 SCAF4O95104 1147 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 KCNK5O95279 499 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 LRG1P02750 347 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 CAPNS1P04632 268 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 HMBSP08397 361 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 CLEC2LP0C7M8 214 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 RARBP10826 455 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 CLUP10909 449 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 TIMP2P16035 220 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 SAT1P21673 171 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 SLC7A1P30825 629 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms