RNA–Protein interactions for RNA: ENST00000564404.5

TRAPPC2L-207, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3

Gene TRAPPC2L, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-207ENST00000564404 PRMT8Q9NR22 394 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC2L-207ENST00000564404 KRT82Q9NSB4 513 aa12.87□□□□□ -0.35
TRAPPC2L-207ENST00000564404 FAM49BQ9NUQ9 324 aa12.87□□□□□ -0.35
TRAPPC2L-207ENST00000564404 GCNT4Q9P109 453 aa12.87□□□□□ -0.35
TRAPPC2L-207ENST00000564404 PCDHA5Q9Y5H7 936 aa12.87□□□□□ -0.35
TRAPPC2L-207ENST00000564404 WNT6Q9Y6F9 365 aa12.87□□□□□ -0.35
TRAPPC2L-207ENST00000564404 OTOL1A6NHN0 477 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 RTN3O95197 1032 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 CD58P19256 250 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 YWHAQP27348 245 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 PPP3CCP48454 512 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 MXI1P50539 228 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 CCR3P51677 355 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 GAS6Q14393 721 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 PPP2R5DQ14738 602 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 PDGFRLQ15198 375 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 DCAF17Q5H9S7 520 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 WDR44Q5JSH3 913 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 DGKKQ5KSL6 1271 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 ISM2Q6H9L7 571 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 Q6ZS52 159 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 PAQR9Q6ZVX9 377 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 UNC93AQ86WB7 457 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 FUKQ8N0W3 1084 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 CPA6Q8N4T0 437 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 C12orf29Q8N999 325 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 SLC2A14Q8TDB8 520 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 ATRIPQ8WXE1 791 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 FBXO32Q969P5 355 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 TIGD1Q96MW7 591 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 HINFPQ9BQA5 517 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 IER2Q9BTL4 223 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 APOBEC3GQ9HC16 384 aaKnown RBP12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 TMEM8AQ9HCN3 771 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 DUS2Q9NX74 493 aaKnown RBP12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 SMPD4Q9NXE4 827 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 SDK1Q7Z5N4 2213 aa12.86□□□□□ -0.35
TRAPPC2L-207ENST00000564404 TRIM49BA6NDI0 452 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 ZNF840PA6NDX5 716 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 ADORA2BP29275 332 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 CXCL12P48061 93 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 SLC5A3P53794 718 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 SATB1Q01826 763 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 ENPEPQ07075 957 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 STIM1Q13586 685 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 KRT39Q6A163 491 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 ANKRD40Q6AI12 368 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 SCAMP5Q8TAC9 235 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 OSCP1Q8WVF1 389 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 ATP2A3Q93084 1043 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 JAKMIP2Q96AA8 810 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 NIF3L1Q9GZT8 377 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 RNF38Q9H0F5 515 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 ZSCAN32Q9NX65 697 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 ARHGAP26Q9UNA1 814 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 PCDHGA2Q9Y5H1 932 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 CPQQ9Y646 472 aa12.85□□□□□ -0.35
TRAPPC2L-207ENST00000564404 GPR179Q6PRD1 2367 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 LEFTY2O00292 366 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 SCAMP3O14828 347 aaKnown RBP12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 STX10O60499 249 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 BEST1O76090 585 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 MBL2P11226 248 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 PFKLP17858 780 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 GTF2H1P32780 548 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 PMS1P54277 932 aaKnown RBP12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 MAP3K7CLP57077 242 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 FKBP3Q00688 224 aaKnown RBP12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 AMPD2Q01433 879 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 INCA1Q0VD86 236 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 GRSF1Q12849 480 aaKnown RBP eCLIP12.84□□□□□ -0.351e-7■■■□□ 17.8
TRAPPC2L-207ENST00000564404 CCINQ13939 588 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 EML3Q32P44 896 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 ZNF394Q53GI3 561 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 COBLL1Q53SF7 1204 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 CRYBG2Q8N1P7 616 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 SPEM1Q8N4L4 309 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 FBXL13Q8NEE6 735 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 PDZD8Q8NEN9 1154 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 SPATA20Q8TB22 786 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 SEMA4DQ92854 862 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 TWNKQ96RR1 684 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 SMOQ99835 787 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 NT5C1AQ9BXI3 368 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 GTPBP4Q9BZE4 634 aaKnown RBP12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 ECT2Q9H8V3 914 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 CYP3A43Q9HB55 503 aa12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 CHORDC1Q9UHD1 332 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC2L-207ENST00000564404 TNFRSF10BO14763 440 aa12.83□□□□□ -0.36
TRAPPC2L-207ENST00000564404 PSMA7O14818 248 aa12.83□□□□□ -0.36
TRAPPC2L-207ENST00000564404 SLC16A3O15427 465 aaKnown RBP12.83□□□□□ -0.36
TRAPPC2L-207ENST00000564404 GADD45BO75293 160 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC2L-207ENST00000564404 OAS1P00973 400 aaKnown RBP12.83□□□□□ -0.36
TRAPPC2L-207ENST00000564404 FAM200BP0CF97 657 aa12.83□□□□□ -0.36
TRAPPC2L-207ENST00000564404 GJA4P35212 333 aa12.83□□□□□ -0.36
TRAPPC2L-207ENST00000564404 NRLP54845 237 aa12.83□□□□□ -0.36
TRAPPC2L-207ENST00000564404 SLC7A9P82251 487 aa12.83□□□□□ -0.36
TRAPPC2L-207ENST00000564404 ZXDBP98169 803 aa12.83□□□□□ -0.36
TRAPPC2L-207ENST00000564404 LRRC63Q05C16 580 aa12.83□□□□□ -0.36
TRAPPC2L-207ENST00000564404 NR1H3Q13133 447 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms