RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 CST3P01034 146 aaPredicted RBP22.25■■□□□ 1.15
HERC2-204ENST00000563945 CYP17A1P05093 508 aa22.25■■□□□ 1.15
HERC2-204ENST00000563945 NOVA1P51513 510 aaKnown RBP22.25■■□□□ 1.15
HERC2-204ENST00000563945 CYP2J2P51589 502 aa22.25■■□□□ 1.15
HERC2-204ENST00000563945 SHC2P98077 582 aa22.25■■□□□ 1.15
HERC2-204ENST00000563945 TAF10Q12962 218 aa22.25■■□□□ 1.15
HERC2-204ENST00000563945 DHCR24Q15392 516 aa22.25■■□□□ 1.15
HERC2-204ENST00000563945 CRY1Q16526 586 aa22.25■■□□□ 1.15
HERC2-204ENST00000563945 PMS2CLQ68D20 193 aa22.25■■□□□ 1.15
HERC2-204ENST00000563945 GLIS3Q8NEA6 775 aa22.25■■□□□ 1.15
HERC2-204ENST00000563945 MRPL45Q9BRJ2 306 aaKnown RBP22.25■■□□□ 1.15
HERC2-204ENST00000563945 RNF38Q9H0F5 515 aa22.25■■□□□ 1.15
HERC2-204ENST00000563945 POLMQ9NP87 494 aaPredicted RBP22.25■■□□□ 1.15
HERC2-204ENST00000563945 BCCIPQ9P287 314 aaKnown RBP eCLIP22.25■■□□□ 1.15
HERC2-204ENST00000563945 CFAP97Q9P2B7 532 aa22.25■■□□□ 1.15
HERC2-204ENST00000563945 TBC1D14Q9P2M4 693 aa22.25■■□□□ 1.15
HERC2-204ENST00000563945 YWHAQP27348 245 aa22.24■■□□□ 1.15
HERC2-204ENST00000563945 FAM26FQ5R3K3 315 aa22.24■■□□□ 1.15
HERC2-204ENST00000563945 RASSF3Q86WH2 238 aa22.24■■□□□ 1.15
HERC2-204ENST00000563945 IQUBQ8NA54 791 aa22.24■■□□□ 1.15
HERC2-204ENST00000563945 XXYLT1Q8NBI6 393 aa22.24■■□□□ 1.15
HERC2-204ENST00000563945 PDZD8Q8NEN9 1154 aa22.24■■□□□ 1.15
HERC2-204ENST00000563945 ZNF507Q8TCN5 953 aa22.24■■□□□ 1.15
HERC2-204ENST00000563945 DHX58Q96C10 678 aa22.24■■□□□ 1.15
HERC2-204ENST00000563945 SPACA7Q96KW9 195 aa22.24■■□□□ 1.15
HERC2-204ENST00000563945 CGRRF1Q99675 332 aa22.24■■□□□ 1.15
HERC2-204ENST00000563945 TRIM9Q9C026 710 aa22.24■■□□□ 1.15
HERC2-204ENST00000563945 TMEM9BQ9NQ34 198 aa22.24■■□□□ 1.15
HERC2-204ENST00000563945 NXF1Q9UBU9 619 aaKnown RBP22.24■■□□□ 1.15
HERC2-204ENST00000563945 ATP8B3O60423 1300 aa22.24■■□□□ 1.15
HERC2-204ENST00000563945 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.23■■□□□ 1.15
HERC2-204ENST00000563945 CLIC2O15247 247 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 SPTLC2O15270 562 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 RTN3O95197 1032 aaPredicted RBP22.23■■□□□ 1.15
HERC2-204ENST00000563945 TIE1P35590 1138 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 SNRPFP62306 86 aaKnown RBP22.23■■□□□ 1.15
HERC2-204ENST00000563945 ZXDBP98169 803 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 BYSLQ13895 437 aaKnown RBP22.23■■□□□ 1.15
HERC2-204ENST00000563945 PSMD6Q15008 389 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 HSF5Q4G112 596 aaPredicted RBP22.23■■□□□ 1.15
HERC2-204ENST00000563945 EOGTQ5NDL2 527 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 BTBD8Q5XKL5 378 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 NUDT18Q6ZVK8 323 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 LPCAT2Q7L5N7 544 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 NUP93Q8N1F7 819 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 PGBD3Q8N328 593 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 PIGKQ92643 395 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 FBXO32Q969P5 355 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 ZNF396Q96N95 335 aaPredicted RBP22.23■■□□□ 1.15
HERC2-204ENST00000563945 MED10Q9BTT4 135 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 ARHGEF4Q9NR80 690 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 AGPAT3Q9NRZ7 376 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 KBTBD4Q9NVX7 518 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 MTMR6Q9Y217 621 aa22.23■■□□□ 1.15
HERC2-204ENST00000563945 ABCA7Q8IZY2 2146 aa22.22■■□□□ 1.15
HERC2-204ENST00000563945 KAT7O95251 611 aa22.22■■□□□ 1.15
HERC2-204ENST00000563945 KLF8O95600 359 aaPredicted RBP22.22■■□□□ 1.15
HERC2-204ENST00000563945 ADH5P11766 374 aa22.22■■□□□ 1.15
HERC2-204ENST00000563945 EIF2DP41214 584 aaKnown RBP22.22■■□□□ 1.15
HERC2-204ENST00000563945 GRIA2P42262 883 aa22.22■■□□□ 1.15
HERC2-204ENST00000563945 SLC6A11P48066 632 aa22.22■■□□□ 1.15
HERC2-204ENST00000563945 NASPP49321 788 aaPredicted RBP22.22■■□□□ 1.15
HERC2-204ENST00000563945 PREPLQ4J6C6 727 aaPredicted RBP22.22■■□□□ 1.15
HERC2-204ENST00000563945 NELFCDQ8IXH7 590 aa22.22■■□□□ 1.15
HERC2-204ENST00000563945 ALLCQ8N6M5 410 aa22.22■■□□□ 1.15
HERC2-204ENST00000563945 TXNDC5Q8NBS9 432 aaKnown RBP22.22■■□□□ 1.15
HERC2-204ENST00000563945 MDGA1Q8NFP4 955 aa22.22■■□□□ 1.15
HERC2-204ENST00000563945 WHAMMQ8TF30 809 aa22.22■■□□□ 1.15
HERC2-204ENST00000563945 SYAP1Q96A49 352 aaPredicted RBP22.22■■□□□ 1.15
HERC2-204ENST00000563945 INTS4Q96HW7 963 aaKnown RBP22.22■■□□□ 1.15
HERC2-204ENST00000563945 FOXD4L1Q9NU39 408 aa22.22■■□□□ 1.15
HERC2-204ENST00000563945 SH3BP1Q9Y3L3 701 aa22.22■■□□□ 1.15
HERC2-204ENST00000563945 THADAQ6YHU6 1953 aa22.21■■□□□ 1.15
HERC2-204ENST00000563945 LNP1A1A4G5 178 aa22.21■■□□□ 1.15
HERC2-204ENST00000563945 SCAMP3O14828 347 aaKnown RBP22.21■■□□□ 1.15
HERC2-204ENST00000563945 STX6O43752 255 aa22.21■■□□□ 1.15
HERC2-204ENST00000563945 ATICP31939 592 aa22.21■■□□□ 1.15
HERC2-204ENST00000563945 CYP24A1Q07973 514 aa22.21■■□□□ 1.15
HERC2-204ENST00000563945 UAP1L1Q3KQV9 507 aa22.21■■□□□ 1.15
HERC2-204ENST00000563945 RHBDF2Q6PJF5 856 aa22.21■■□□□ 1.15
HERC2-204ENST00000563945 LINC00301Q8NCQ3 95 aa22.21■■□□□ 1.15
HERC2-204ENST00000563945 B3GALNT2Q8NCR0 500 aa22.21■■□□□ 1.15
HERC2-204ENST00000563945 NUSAP1Q9BXS6 441 aaKnown RBP22.21■■□□□ 1.15
HERC2-204ENST00000563945 ZNF518BQ9C0D4 1074 aa22.21■■□□□ 1.15
HERC2-204ENST00000563945 E2F8A0AVK6 867 aa22.2■■□□□ 1.14
HERC2-204ENST00000563945 TBC1D3BA6NDS4 549 aa22.2■■□□□ 1.14
HERC2-204ENST00000563945 OLFM2O95897 454 aa22.2■■□□□ 1.14
HERC2-204ENST00000563945 OAS1P00973 400 aaKnown RBP22.2■■□□□ 1.14
HERC2-204ENST00000563945 BCKDHBP21953 392 aa22.2■■□□□ 1.14
HERC2-204ENST00000563945 HOXD13P35453 343 aa22.2■■□□□ 1.14
HERC2-204ENST00000563945 TNFRSF4P43489 277 aa22.2■■□□□ 1.14
HERC2-204ENST00000563945 GAD2Q05329 585 aa22.2■■□□□ 1.14
HERC2-204ENST00000563945 GAB4Q2WGN9 574 aa22.2■■□□□ 1.14
HERC2-204ENST00000563945 HECTD3Q5T447 861 aa22.2■■□□□ 1.14
HERC2-204ENST00000563945 SH3PXD2AQ5TCZ1 1133 aa22.2■■□□□ 1.14
HERC2-204ENST00000563945 OVCA2Q8WZ82 227 aa22.2■■□□□ 1.14
HERC2-204ENST00000563945 OTUB2Q96DC9 234 aa22.2■■□□□ 1.14
HERC2-204ENST00000563945 B3GNT5Q9BYG0 378 aa22.2■■□□□ 1.14
HERC2-204ENST00000563945 NACA2Q9H009 215 aa22.2■■□□□ 1.14
HERC2-204ENST00000563945 DPEP3Q9H4B8 488 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms