RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 TBXAS1P24557 533 aaPredicted RBP17.57■□□□□ 0.4
CDT1-202ENST00000562747 DDX6P26196 483 aaKnown RBP eCLIP17.57■□□□□ 0.4
CDT1-202ENST00000562747 CUL2Q13617 745 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 DENND5BQ6ZUT9 1274 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 PAQR9Q6ZVX9 377 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 FAM35AQ86V20 835 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 FAM114A1Q8IWE2 563 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 STKLD1Q8NE28 680 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 ZSCAN18Q8TBC5 510 aaPredicted RBP17.57■□□□□ 0.4
CDT1-202ENST00000562747 WHAMMQ8TF30 809 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 SMARCD1Q96GM5 515 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 TWNKQ96RR1 684 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 NELL2Q99435 816 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 MED10Q9BTT4 135 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 TASP1Q9H6P5 420 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 BRD9Q9H8M2 597 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 CISHQ9NSE2 258 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 NCAM2O15394 837 aa17.56■□□□□ 0.4
CDT1-202ENST00000562747 WEE1P30291 646 aa17.56■□□□□ 0.4
CDT1-202ENST00000562747 VIPR2P41587 438 aa17.56■□□□□ 0.4
CDT1-202ENST00000562747 ATXN1P54253 815 aaKnown RBP17.56■□□□□ 0.4
CDT1-202ENST00000562747 YWHAEP62258 255 aaKnown RBP17.56■□□□□ 0.4
CDT1-202ENST00000562747 ORC1Q13415 861 aa17.56■□□□□ 0.4
CDT1-202ENST00000562747 GPR158Q5T848 1215 aa17.56■□□□□ 0.4
CDT1-202ENST00000562747 TMEM150AQ86TG1 271 aa17.56■□□□□ 0.4
CDT1-202ENST00000562747 IRF2BP1Q8IU81 584 aa17.56■□□□□ 0.4
CDT1-202ENST00000562747 FUKQ8N0W3 1084 aa17.56■□□□□ 0.4
CDT1-202ENST00000562747 LMO3Q8TAP4 145 aa17.56■□□□□ 0.4
CDT1-202ENST00000562747 E2F7Q96AV8 911 aa17.56■□□□□ 0.4
CDT1-202ENST00000562747 NT5C1BQ96P26 610 aa17.56■□□□□ 0.4
CDT1-202ENST00000562747 ARID3AQ99856 593 aa17.56■□□□□ 0.4
CDT1-202ENST00000562747 TRMT61BQ9BVS5 477 aaKnown RBP17.56■□□□□ 0.4
CDT1-202ENST00000562747 TTLL2Q9BWV7 592 aa17.56■□□□□ 0.4
CDT1-202ENST00000562747 CHRDQ9H2X0 955 aa17.56■□□□□ 0.4
CDT1-202ENST00000562747 MRPS17Q9Y2R5 130 aaKnown RBP17.56■□□□□ 0.4
CDT1-202ENST00000562747 GREB1Q4ZG55 1949 aa17.56■□□□□ 0.4
CDT1-202ENST00000562747 F5P12259 2224 aa17.55■□□□□ 0.4
CDT1-202ENST00000562747 KMT2BQ9UMN6 2715 aaPredicted RBP17.55■□□□□ 0.4
CDT1-202ENST00000562747 CCDC130P13994 396 aa17.55■□□□□ 0.4
CDT1-202ENST00000562747 CACNA2D1P54289 1103 aa17.55■□□□□ 0.4
CDT1-202ENST00000562747 CYP4F8P98187 520 aa17.55■□□□□ 0.4
CDT1-202ENST00000562747 STXBP5Q5T5C0 1151 aa17.55■□□□□ 0.4
CDT1-202ENST00000562747 SASS6Q6UVJ0 657 aa17.55■□□□□ 0.4
CDT1-202ENST00000562747 CREBRFQ8IUR6 639 aa17.55■□□□□ 0.4
CDT1-202ENST00000562747 C12orf29Q8N999 325 aa17.55■□□□□ 0.4
CDT1-202ENST00000562747 EHBP1Q8NDI1 1231 aa17.55■□□□□ 0.4
CDT1-202ENST00000562747 SLC2A14Q8TDB8 520 aa17.55■□□□□ 0.4
CDT1-202ENST00000562747 MRPS31Q92665 395 aaKnown RBP17.55■□□□□ 0.4
CDT1-202ENST00000562747 RSPRY1Q96DX4 576 aa17.55■□□□□ 0.4
CDT1-202ENST00000562747 CYFIP2Q96F07 1278 aa17.55■□□□□ 0.4
CDT1-202ENST00000562747 CNTNAP3BQ96NU0 1288 aa17.55■□□□□ 0.4
CDT1-202ENST00000562747 HNRNPABQ99729 332 aaKnown RBP17.55■□□□□ 0.4
CDT1-202ENST00000562747 CNTNAP3Q9BZ76 1288 aa17.55■□□□□ 0.4
CDT1-202ENST00000562747 DMAP1Q9NPF5 467 aaPredicted RBP17.55■□□□□ 0.4
CDT1-202ENST00000562747 KRT82Q9NSB4 513 aa17.55■□□□□ 0.4
CDT1-202ENST00000562747 TMEM30AQ9NV96 361 aa17.55■□□□□ 0.4
CDT1-202ENST00000562747 DENND4CQ5VZ89 1909 aa17.55■□□□□ 0.4
CDT1-202ENST00000562747 SPTBN2O15020 2390 aa17.54■□□□□ 0.4
CDT1-202ENST00000562747 OBSL1O75147 1896 aa17.54■□□□□ 0.4
CDT1-202ENST00000562747 NUP210Q8TEM1 1887 aaPredicted RBP17.54■□□□□ 0.4
CDT1-202ENST00000562747 TADA3O75528 432 aa17.54■□□□□ 0.4
CDT1-202ENST00000562747 AP1G2O75843 785 aa17.54■□□□□ 0.4
CDT1-202ENST00000562747 GDI1P31150 447 aa17.54■□□□□ 0.4
CDT1-202ENST00000562747 LRMPQ12912 555 aa17.54■□□□□ 0.4
CDT1-202ENST00000562747 LPAL2Q16609 132 aa17.54■□□□□ 0.4
CDT1-202ENST00000562747 ZNF394Q53GI3 561 aa17.54■□□□□ 0.4
CDT1-202ENST00000562747 ARID3BQ8IVW6 561 aaPredicted RBP17.54■□□□□ 0.4
CDT1-202ENST00000562747 NUP93Q8N1F7 819 aa17.54■□□□□ 0.4
CDT1-202ENST00000562747 DEPDC1BQ8WUY9 529 aa17.54■□□□□ 0.4
CDT1-202ENST00000562747 TMEM176AQ96HP8 235 aa17.54■□□□□ 0.4
CDT1-202ENST00000562747 CSNK1G1Q9HCP0 422 aa17.54■□□□□ 0.4
CDT1-202ENST00000562747 FAM49BQ9NUQ9 324 aa17.54■□□□□ 0.4
CDT1-202ENST00000562747 ANO10Q9NW15 660 aa17.54■□□□□ 0.4
CDT1-202ENST00000562747 USP18Q9UMW8 372 aa17.54■□□□□ 0.4
CDT1-202ENST00000562747 PIAS3Q9Y6X2 628 aa17.54■□□□□ 0.4
CDT1-202ENST00000562747 EPG5Q9HCE0 2579 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 ARNTLO00327 626 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 MAN2B1O00754 1011 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 RTN3O95197 1032 aaPredicted RBP17.53■□□□□ 0.4
CDT1-202ENST00000562747 FAM200BP0CF97 657 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 PSMC3P17980 439 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 MTIF2P46199 727 aaKnown RBP17.53■□□□□ 0.4
CDT1-202ENST00000562747 PPP3CCP48454 512 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 RAD23BP54727 409 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 USP46P62068 366 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 GAS6Q14393 721 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 MON1AQ86VX9 555 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 CMTM8Q8IZV2 173 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 PPM1KQ8N3J5 372 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 GPR161Q8N6U8 529 aaKnown RBP17.53■□□□□ 0.4
CDT1-202ENST00000562747 UBR7Q8N806 425 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 SLC4A11Q8NBS3 891 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 ENOX1Q8TC92 643 aaKnown RBP17.53■□□□□ 0.4
CDT1-202ENST00000562747 IRF7Q92985 503 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 HEXIM2Q96MH2 286 aaKnown RBP17.53■□□□□ 0.4
CDT1-202ENST00000562747 KCNK16Q96T55 309 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 SMOQ99835 787 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 SLC46A2Q9BY10 475 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 COMMD8Q9NX08 183 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 OBP2AQ9NY56 170 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms