RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 CREBRFQ8IUR6 639 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 NUP93Q8N1F7 819 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 CCDC150Q8NCX0 1101 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 ZMIZ2Q8NF64 920 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 WHAMMQ8TF30 809 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 NELFBQ8WX92 580 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 NKD2Q969F2 451 aaPredicted RBP10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 CLDN23Q96B33 292 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 CHFRQ96EP1 664 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 SMARCD1Q96GM5 515 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 TNIP3Q96KP6 325 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 TIGD1Q96MW7 591 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 NELL2Q99435 816 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 FAM83CQ9BQN1 747 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 NIF3L1Q9GZT8 377 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 C8orf33Q9H7E9 229 aaPredicted RBP10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 TMEM8AQ9HCN3 771 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 DMAP1Q9NPF5 467 aaPredicted RBP10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 TRPV5Q9NQA5 729 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 OBP2AQ9NY56 170 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 HOOK1Q9UJC3 728 aaKnown RBP10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 NUDT5Q9UKK9 219 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 CPQQ9Y646 472 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 RIF1Q5UIP0 2472 aaKnown RBP10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 PPP1R3GB7ZBB8 358 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 PSMA7O14818 248 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 MDM4O15151 490 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 MAPK13O15264 365 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 EGFP01133 1207 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 CALCAP01258 141 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 FAM163BP0C2L3 166 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 PXNP49023 591 aaPredicted RBP10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 PLCB2Q00722 1185 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 USP4Q13107 963 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 SRSF5Q13243 272 aaKnown RBP10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 LPAL2Q16609 132 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 PKN3Q6P5Z2 889 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 DCLK2Q8N568 766 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 SPATA20Q8TB22 786 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 TMEM174Q8WUU8 243 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 TAF4BQ92750 862 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 WBP2Q969T9 261 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 CYFIP2Q96F07 1278 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 HEXIM2Q96MH2 286 aaKnown RBP10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 SLITRK1Q96PX8 696 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 DUSP9Q99956 384 aaKnown RBP10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 HINFPQ9BQA5 517 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 TTLL2Q9BWV7 592 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 NT5C1AQ9BXI3 368 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 OSBPL6Q9BZF3 934 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 CCSER2Q9H7U1 834 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 KIF9Q9HAQ2 790 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 RAB20Q9NX57 234 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 CHMP5Q9NZZ3 219 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 CFAP97Q9P2B7 532 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 MYO15AQ9UKN7 3530 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 DMDP11532 3685 aa10.04□□□□□ -0.8
NSMCE1-203ENST00000562039 MYOFQ9NZM1 2061 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 PATJQ8NI35 1801 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 CHURC1-FNTBB4DL54 471 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 TNFRSF10BO14763 440 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 CILPO75339 1184 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 FAM200BP0CF97 657 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 WEE1P30291 646 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 GJA4P35212 333 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 FNTBP49356 437 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 GALK1P51570 392 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 FKBP3Q00688 224 aaKnown RBP10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 STIM1Q13586 685 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 MORC3Q14149 939 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 EML3Q32P44 896 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 PPP1R26Q5T8A7 1209 aaPredicted RBP10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 FSTL4Q6MZW2 842 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 CLEC20AQ6ZU45 233 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 FILIP1Q7Z7B0 1213 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 UNC93AQ86WB7 457 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 RALGPS2Q86X27 583 aaPredicted RBP10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 CRYBG2Q8N1P7 616 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 FBXL13Q8NEE6 735 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 KAT5Q92993 513 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 NACA2Q9H009 215 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 CHRDQ9H2X0 955 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 ECT2Q9H8V3 914 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 CISHQ9NSE2 258 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 ARMCX3Q9UH62 379 aaPredicted RBP10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 CIZ1Q9ULV3 898 aaPredicted RBP10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 ARHGAP26Q9UNA1 814 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 FAM186AA6NE01 2351 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 GPR179Q6PRD1 2367 aa10.03□□□□□ -0.8
NSMCE1-203ENST00000562039 SDK1Q7Z5N4 2213 aa10.02□□□□□ -0.81
NSMCE1-203ENST00000562039 EP300Q09472 2414 aaPredicted RBP10.02□□□□□ -0.81
NSMCE1-203ENST00000562039 SLC16A3O15427 465 aaKnown RBP10.02□□□□□ -0.81
NSMCE1-203ENST00000562039 CYP26A1O43174 497 aa10.02□□□□□ -0.81
NSMCE1-203ENST00000562039 COCHO43405 550 aa10.02□□□□□ -0.81
NSMCE1-203ENST00000562039 RTN3O95197 1032 aaPredicted RBP10.02□□□□□ -0.81
NSMCE1-203ENST00000562039 TBX18O95935 607 aa10.02□□□□□ -0.81
NSMCE1-203ENST00000562039 OAS1P00973 400 aaKnown RBP10.02□□□□□ -0.81
NSMCE1-203ENST00000562039 ACO1P21399 889 aaKnown RBP10.02□□□□□ -0.81
NSMCE1-203ENST00000562039 GTF2H1P32780 548 aa10.02□□□□□ -0.81
NSMCE1-203ENST00000562039 ANP32AP39687 249 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms