RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 OAS1P00973 400 aaKnown RBP16.96■□□□□ 0.31
LMX1B-204ENST00000561065 CCDC130P13994 396 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 TCF3P15923 654 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 PSMC2P35998 433 aaKnown RBP16.96■□□□□ 0.31
LMX1B-204ENST00000561065 PIK3CAP42336 1068 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 GCLMP48507 274 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 VAMP7P51809 220 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 ENPEPQ07075 957 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 IFRD2Q12894 506 aaPredicted RBP16.96■□□□□ 0.31
LMX1B-204ENST00000561065 TAF10Q12962 218 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 ADAM9Q13443 819 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 EML3Q32P44 896 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 DGKKQ5KSL6 1271 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 ZNF658Q5TYW1 1059 aaPredicted RBP16.96■□□□□ 0.31
LMX1B-204ENST00000561065 INTS8Q75QN2 995 aaKnown RBP16.96■□□□□ 0.31
LMX1B-204ENST00000561065 ACOT1Q86TX2 421 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 FUKQ8N0W3 1084 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 ZMIZ2Q8NF64 920 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 ENGASEQ8NFI3 743 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 TAS1R2Q8TE23 839 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 OSCP1Q8WVF1 389 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 EZH1Q92800 747 aaPredicted RBP16.96■□□□□ 0.31
LMX1B-204ENST00000561065 TWNKQ96RR1 684 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 RNF38Q9H0F5 515 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 FBRSL1Q9HCM7 1045 aaKnown RBP16.96■□□□□ 0.31
LMX1B-204ENST00000561065 SMG5Q9UPR3 1016 aaKnown RBP16.96■□□□□ 0.31
LMX1B-204ENST00000561065 MYOFQ9NZM1 2061 aa16.96■□□□□ 0.31
LMX1B-204ENST00000561065 CETN3O15182 167 aa16.96■□□□□ 0.3
LMX1B-204ENST00000561065 STX10O60499 249 aa16.96■□□□□ 0.3
LMX1B-204ENST00000561065 PAPSS2O95340 614 aaPredicted RBP16.96■□□□□ 0.3
LMX1B-204ENST00000561065 HDCP19113 662 aa16.96■□□□□ 0.3
LMX1B-204ENST00000561065 GJA4P35212 333 aa16.96■□□□□ 0.3
LMX1B-204ENST00000561065 CXCL12P48061 93 aa16.96■□□□□ 0.3
LMX1B-204ENST00000561065 NDST1P52848 882 aa16.96■□□□□ 0.3
LMX1B-204ENST00000561065 PDGFRLQ15198 375 aa16.96■□□□□ 0.3
LMX1B-204ENST00000561065 EDRF1Q3B7T1 1238 aa16.96■□□□□ 0.3
LMX1B-204ENST00000561065 FAM186BQ8IYM0 893 aa16.96■□□□□ 0.3
LMX1B-204ENST00000561065 CCDC150Q8NCX0 1101 aa16.96■□□□□ 0.3
LMX1B-204ENST00000561065 ATRIPQ8WXE1 791 aa16.96■□□□□ 0.3
LMX1B-204ENST00000561065 ERCC4Q92889 916 aaPredicted RBP16.96■□□□□ 0.3
LMX1B-204ENST00000561065 EEF2KMTQ96G04 330 aa16.96■□□□□ 0.3
LMX1B-204ENST00000561065 ECT2Q9H8V3 914 aa16.96■□□□□ 0.3
LMX1B-204ENST00000561065 KRT82Q9NSB4 513 aa16.96■□□□□ 0.3
LMX1B-204ENST00000561065 DUS2Q9NX74 493 aaKnown RBP16.96■□□□□ 0.3
LMX1B-204ENST00000561065 TRPM5Q9NZQ8 1165 aa16.96■□□□□ 0.3
LMX1B-204ENST00000561065 CEP250Q9BV73 2442 aa16.95■□□□□ 0.3
LMX1B-204ENST00000561065 TRDMT1O14717 391 aaKnown RBP16.95■□□□□ 0.3
LMX1B-204ENST00000561065 TNFRSF10BO14763 440 aa16.95■□□□□ 0.3
LMX1B-204ENST00000561065 SCAMP3O14828 347 aaKnown RBP16.95■□□□□ 0.3
LMX1B-204ENST00000561065 BEST1O76090 585 aa16.95■□□□□ 0.3
LMX1B-204ENST00000561065 EGFP01133 1207 aa16.95■□□□□ 0.3
LMX1B-204ENST00000561065 SLC5A3P53794 718 aa16.95■□□□□ 0.3
LMX1B-204ENST00000561065 UBE2HP62256 183 aa16.95■□□□□ 0.3
LMX1B-204ENST00000561065 SGSM1Q2NKQ1 1148 aa16.95■□□□□ 0.3
LMX1B-204ENST00000561065 GAB4Q2WGN9 574 aa16.95■□□□□ 0.3
LMX1B-204ENST00000561065 CC2D1AQ6P1N0 951 aaPredicted RBP16.95■□□□□ 0.3
LMX1B-204ENST00000561065 SCAMP5Q8TAC9 235 aa16.95■□□□□ 0.3
LMX1B-204ENST00000561065 RUBCNQ92622 972 aa16.95■□□□□ 0.3
LMX1B-204ENST00000561065 TAF4BQ92750 862 aa16.95■□□□□ 0.3
LMX1B-204ENST00000561065 SMOQ99835 787 aa16.95■□□□□ 0.3
LMX1B-204ENST00000561065 FAM126AQ9BYI3 521 aaPredicted RBP16.95■□□□□ 0.3
LMX1B-204ENST00000561065 IMPG2Q9BZV3 1241 aa16.95■□□□□ 0.3
LMX1B-204ENST00000561065 LINC00597Q9H2U6 94 aa16.95■□□□□ 0.3
LMX1B-204ENST00000561065 MMRN2Q9H8L6 949 aa16.95■□□□□ 0.3
LMX1B-204ENST00000561065 FAM49BQ9NUQ9 324 aa16.95■□□□□ 0.3
LMX1B-204ENST00000561065 CHURC1-FNTBB4DL54 471 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 LEFTY2O00292 366 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 PSMA7O14818 248 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 IFNAR2P48551 515 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 FNTBP49356 437 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 PGFP49763 221 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 MCCD1P59942 119 aaPredicted RBP16.94■□□□□ 0.3
LMX1B-204ENST00000561065 SLC7A9P82251 487 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 INCA1Q0VD86 236 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 SRSF5Q13243 272 aaKnown RBP16.94■□□□□ 0.3
LMX1B-204ENST00000561065 COBLL1Q53SF7 1204 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 KIAA2013Q8IYS2 634 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 NUP93Q8N1F7 819 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 CPA6Q8N4T0 437 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 C12orf29Q8N999 325 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 SLC2A14Q8TDB8 520 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 SMARCD1Q96GM5 515 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 TNIP3Q96KP6 325 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 ZFRQ96KR1 1074 aaKnown RBP16.94■□□□□ 0.3
LMX1B-204ENST00000561065 HINFPQ9BQA5 517 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 MED10Q9BTT4 135 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 DMAP1Q9NPF5 467 aaPredicted RBP16.94■□□□□ 0.3
LMX1B-204ENST00000561065 POLR3BQ9NW08 1133 aaPredicted RBP16.94■□□□□ 0.3
LMX1B-204ENST00000561065 SMPD4Q9NXE4 827 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 IL37Q9NZH6 218 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 PCDHA5Q9Y5H7 936 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 CPQQ9Y646 472 aa16.94■□□□□ 0.3
LMX1B-204ENST00000561065 ATP8B3O60423 1300 aa16.93■□□□□ 0.3
LMX1B-204ENST00000561065 AP1G2O75843 785 aa16.93■□□□□ 0.3
LMX1B-204ENST00000561065 EPB41P11171 864 aaKnown RBP16.93■□□□□ 0.3
LMX1B-204ENST00000561065 PFKLP17858 780 aa16.93■□□□□ 0.3
LMX1B-204ENST00000561065 PRCPP42785 496 aa16.93■□□□□ 0.3
LMX1B-204ENST00000561065 PMS1P54277 932 aaKnown RBP16.93■□□□□ 0.3
LMX1B-204ENST00000561065 FKBP3Q00688 224 aaKnown RBP16.93■□□□□ 0.3
LMX1B-204ENST00000561065 GPRIN1Q7Z2K8 1008 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms