RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 VNN1O95497 513 aa17.25■□□□□ 0.35
SNX1-213ENST00000561026 ABL1P00519 1130 aa17.25■□□□□ 0.35
SNX1-213ENST00000561026 NR3C1P04150 777 aa17.25■□□□□ 0.35
SNX1-213ENST00000561026 ATXN1P54253 815 aaKnown RBP17.25■□□□□ 0.35
SNX1-213ENST00000561026 DLG4P78352 724 aa17.25■□□□□ 0.35
SNX1-213ENST00000561026 ZNF667Q5HYK9 610 aa17.25■□□□□ 0.35
SNX1-213ENST00000561026 NUP93Q8N1F7 819 aa17.25■□□□□ 0.35
SNX1-213ENST00000561026 CAMKK1Q8N5S9 505 aa17.25■□□□□ 0.35
SNX1-213ENST00000561026 FAM160A2Q8N612 972 aaPredicted RBP17.25■□□□□ 0.35
SNX1-213ENST00000561026 EZH1Q92800 747 aaPredicted RBP17.25■□□□□ 0.35
SNX1-213ENST00000561026 SPATA32Q96LK8 384 aa17.25■□□□□ 0.35
SNX1-213ENST00000561026 SLITRK1Q96PX8 696 aa17.25■□□□□ 0.35
SNX1-213ENST00000561026 SEMA4GQ9NTN9 838 aa17.25■□□□□ 0.35
SNX1-213ENST00000561026 POLR3BQ9NW08 1133 aaPredicted RBP17.25■□□□□ 0.35
SNX1-213ENST00000561026 CDV3Q9UKY7 258 aaKnown RBP17.25■□□□□ 0.35
SNX1-213ENST00000561026 ZDHHC9Q9Y397 364 aa17.25■□□□□ 0.35
SNX1-213ENST00000561026 ATG2BQ96BY7 2078 aa17.24■□□□□ 0.35
SNX1-213ENST00000561026 NFATC1O95644 943 aa17.24■□□□□ 0.35
SNX1-213ENST00000561026 OAS1P00973 400 aaKnown RBP17.24■□□□□ 0.35
SNX1-213ENST00000561026 YWHAQP27348 245 aa17.24■□□□□ 0.35
SNX1-213ENST00000561026 RAP1GAPP47736 663 aa17.24■□□□□ 0.35
SNX1-213ENST00000561026 CSRP2Q16527 193 aa17.24■□□□□ 0.35
SNX1-213ENST00000561026 SGSM1Q2NKQ1 1148 aa17.24■□□□□ 0.35
SNX1-213ENST00000561026 ZACNQ401N2 412 aa17.24■□□□□ 0.35
SNX1-213ENST00000561026 PAQR9Q6ZVX9 377 aa17.24■□□□□ 0.35
SNX1-213ENST00000561026 RPLP0P6Q8NHW5 317 aa17.24■□□□□ 0.35
SNX1-213ENST00000561026 TMC2Q8TDI7 906 aa17.24■□□□□ 0.35
SNX1-213ENST00000561026 GAB3Q8WWW8 586 aa17.24■□□□□ 0.35
SNX1-213ENST00000561026 ELMO3Q96BJ8 720 aa17.24■□□□□ 0.35
SNX1-213ENST00000561026 CHAMP1Q96JM3 812 aa17.24■□□□□ 0.35
SNX1-213ENST00000561026 TNIP3Q96KP6 325 aa17.24■□□□□ 0.35
SNX1-213ENST00000561026 KCNK16Q96T55 309 aa17.24■□□□□ 0.35
SNX1-213ENST00000561026 SDCBP2Q9H190 292 aa17.24■□□□□ 0.35
SNX1-213ENST00000561026 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.24■□□□□ 0.35
SNX1-213ENST00000561026 SDK1Q7Z5N4 2213 aa17.23■□□□□ 0.35
SNX1-213ENST00000561026 IKBKBO14920 756 aa17.23■□□□□ 0.35
SNX1-213ENST00000561026 RPP40O75818 363 aaKnown RBP17.23■□□□□ 0.35
SNX1-213ENST00000561026 RTN3O95197 1032 aaPredicted RBP17.23■□□□□ 0.35
SNX1-213ENST00000561026 RPN1P04843 607 aaKnown RBP17.23■□□□□ 0.35
SNX1-213ENST00000561026 SYKP43405 635 aa17.23■□□□□ 0.35
SNX1-213ENST00000561026 KRT85P78386 507 aa17.23■□□□□ 0.35
SNX1-213ENST00000561026 IFRD2Q12894 506 aaPredicted RBP17.23■□□□□ 0.35
SNX1-213ENST00000561026 SYT13Q7L8C5 426 aa17.23■□□□□ 0.35
SNX1-213ENST00000561026 FILIP1Q7Z7B0 1213 aa17.23■□□□□ 0.35
SNX1-213ENST00000561026 ADGRG2Q8IZP9 1017 aa17.23■□□□□ 0.35
SNX1-213ENST00000561026 SMPD4Q9NXE4 827 aa17.23■□□□□ 0.35
SNX1-213ENST00000561026 CPQQ9Y646 472 aa17.23■□□□□ 0.35
SNX1-213ENST00000561026 SPTBN2O15020 2390 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 ATP8B3O60423 1300 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 FAM237AA0A1B0GTK4 181 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 CLSTN1O94985 981 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 P4HA1P13674 534 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 OPRD1P41143 372 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 NDUFA8P51970 172 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 GAB4Q2WGN9 574 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 CEP135Q66GS9 1140 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 SCARA5Q6ZMJ2 495 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 SV2AQ7L0J3 742 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 CACNA2D4Q7Z3S7 1137 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 FAM35AQ86V20 835 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 PDZD8Q8NEN9 1154 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 CCDC26Q8TAB7 109 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 SCAMP5Q8TAC9 235 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 OVCA2Q8WZ82 227 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 RTKNQ9BST9 563 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 MED10Q9BTT4 135 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 TRAF3IP3Q9Y228 551 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 FRMD4BQ9Y2L6 1034 aa17.22■□□□□ 0.35
SNX1-213ENST00000561026 SLC9A3R1O14745 358 aaPredicted RBP17.21■□□□□ 0.35
SNX1-213ENST00000561026 TNFRSF10BO14763 440 aa17.21■□□□□ 0.35
SNX1-213ENST00000561026 CALUO43852 315 aaPredicted RBP17.21■□□□□ 0.35
SNX1-213ENST00000561026 AKAP3O75969 853 aa17.21■□□□□ 0.35
SNX1-213ENST00000561026 RHOBTB3O94955 611 aa17.21■□□□□ 0.35
SNX1-213ENST00000561026 CCDC192P0DO97 292 aa17.21■□□□□ 0.35
SNX1-213ENST00000561026 C1orf220Q5T0J3 134 aa17.21■□□□□ 0.35
SNX1-213ENST00000561026 PRR23CQ6ZRP0 262 aa17.21■□□□□ 0.35
SNX1-213ENST00000561026 ACOT1Q86TX2 421 aa17.21■□□□□ 0.35
SNX1-213ENST00000561026 FUKQ8N0W3 1084 aa17.21■□□□□ 0.35
SNX1-213ENST00000561026 CRYBG2Q8N1P7 616 aa17.21■□□□□ 0.35
SNX1-213ENST00000561026 TAF4BQ92750 862 aa17.21■□□□□ 0.35
SNX1-213ENST00000561026 FBXO32Q969P5 355 aa17.21■□□□□ 0.35
SNX1-213ENST00000561026 ACDQ96AP0 544 aa17.21■□□□□ 0.35
SNX1-213ENST00000561026 SMARCD1Q96GM5 515 aa17.21■□□□□ 0.35
SNX1-213ENST00000561026 LOXL4Q96JB6 756 aa17.21■□□□□ 0.35
SNX1-213ENST00000561026 HHIPQ96QV1 700 aa17.21■□□□□ 0.35
SNX1-213ENST00000561026 DMAP1Q9NPF5 467 aaPredicted RBP17.21■□□□□ 0.35
SNX1-213ENST00000561026 IL37Q9NZH6 218 aa17.21■□□□□ 0.35
SNX1-213ENST00000561026 CFAP97Q9P2B7 532 aa17.21■□□□□ 0.35
SNX1-213ENST00000561026 CHORDC1Q9UHD1 332 aaPredicted RBP17.21■□□□□ 0.35
SNX1-213ENST00000561026 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.2■□□□□ 0.34
SNX1-213ENST00000561026 K7EQS6 105 aa17.2■□□□□ 0.34
SNX1-213ENST00000561026 AXIN1O15169 862 aa17.2■□□□□ 0.34
SNX1-213ENST00000561026 COCHO43405 550 aa17.2■□□□□ 0.34
SNX1-213ENST00000561026 FOXD2O60548 495 aaPredicted RBP17.2■□□□□ 0.34
SNX1-213ENST00000561026 KIF20AO95235 890 aa17.2■□□□□ 0.34
SNX1-213ENST00000561026 ASS1P00966 412 aaKnown RBP17.2■□□□□ 0.34
SNX1-213ENST00000561026 CYP17A1P05093 508 aa17.2■□□□□ 0.34
SNX1-213ENST00000561026 MBL2P11226 248 aaPredicted RBP17.2■□□□□ 0.34
SNX1-213ENST00000561026 SLC5A3P53794 718 aa17.2■□□□□ 0.34
SNX1-213ENST00000561026 DMC1Q14565 340 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms