RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 PCDH19Q8TAB3 1148 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 STAG1Q8WVM7 1258 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 PTPRN2Q92932 1015 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 ATP6V0A1Q93050 837 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 ZNF503Q96F45 646 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 TCF25Q9BQ70 676 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 C16orf70Q9BSU1 422 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 DDX23Q9BUQ8 820 aaKnown RBP4.4□□□□□ -1.71
HERC1-211ENST00000560983 KATNAL1Q9BW62 490 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 ZDHHC5Q9C0B5 715 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 RNPEPQ9H4A4 650 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 ARHGEF3Q9NR81 526 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 LZTS1Q9Y250 596 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 ATG2AQ2TAZ0 1938 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 TENM4Q6N022 2769 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 NBPF19A0A087WUL8 3843 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 AKAP13Q12802 2813 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 ZNF561-AS1K7EIQ3 104 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 PLA2G6O60733 806 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 C1QL1O75973 258 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 C4BPAP04003 597 aaKnown RBP4.39□□□□□ -1.71
HERC1-211ENST00000560983 GHRP10912 638 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 PLA2G2AP14555 144 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 GJA4P35212 333 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 SRSF1Q07955 248 aaKnown RBP eCLIP4.39□□□□□ -1.71
HERC1-211ENST00000560983 MGAT3Q09327 533 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 PAK1Q13153 545 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 FOXE3Q13461 319 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 MTX1Q13505 466 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 COL28A1Q2UY09 1125 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 HS1BP3Q53T59 392 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 AGBL4Q5VU57 503 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 FOXB2Q5VYV0 432 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 BTBD8Q5XKL5 378 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 DCLRE1AQ6PJP8 1040 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 TMED8Q6PL24 325 aaPredicted RBP4.39□□□□□ -1.71
HERC1-211ENST00000560983 SLC30A10Q6XR72 485 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 SEPT14Q6ZU15 432 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 GPR149Q86SP6 731 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 WDR63Q8IWG1 891 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 SCUBE1Q8IWY4 988 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 GMCL1P1Q8NEA9 526 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 PPTC7Q8NI37 304 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 SLC22A17Q8WUG5 538 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 CFHR4Q92496 578 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 MRPS27Q92552 414 aaKnown RBP4.39□□□□□ -1.71
HERC1-211ENST00000560983 CLDN23Q96B33 292 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 SCYL1Q96KG9 808 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 LRRC37BQ96QE4 947 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 SCNM1Q9BWG6 230 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 CRNKL1Q9BZJ0 848 aaKnown RBP4.39□□□□□ -1.71
HERC1-211ENST00000560983 CCDC113Q9H0I3 377 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 AGO3Q9H9G7 860 aaKnown RBP4.39□□□□□ -1.71
HERC1-211ENST00000560983 SLC2A4RGQ9NR83 387 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 TYW1Q9NV66 732 aaKnown RBP4.39□□□□□ -1.71
HERC1-211ENST00000560983 CBLCQ9ULV8 474 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 OAZ3Q9UMX2 235 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 MICAL3Q7RTP6 2002 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 MYO10Q9HD67 2058 aa4.39□□□□□ -1.71
HERC1-211ENST00000560983 MCM3APO60318 1980 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 TRIP12Q14669 1992 aaPredicted RBP4.38□□□□□ -1.71
HERC1-211ENST00000560983 PARP14Q460N5 1801 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 TRBV23-1A0A0A0MS06 115 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 KANSL1LA0AUZ9 987 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 C17orf102A2RUQ5 167 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 PDPK1O15530 556 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 PRB1P04280 392 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 ICAM1P05362 532 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 SMIM10L2AP0DMW4 78 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 SMIM10L2BP0DMW5 78 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 EPCAMP16422 314 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 COMTP21964 271 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 CALML3P27482 149 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 STAT2P52630 851 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 RAC3P60763 192 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 RPS6P62753 249 aaKnown RBP4.38□□□□□ -1.71
HERC1-211ENST00000560983 SUMO1P63165 101 aaKnown RBP4.38□□□□□ -1.71
HERC1-211ENST00000560983 IL13RA1P78552 427 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 KLF10Q13118 480 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 EIF4HQ15056 248 aaKnown RBP4.38□□□□□ -1.71
HERC1-211ENST00000560983 PTPN14Q15678 1187 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 LETM2Q2VYF4 491 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 HSDL1Q3SXM5 330 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 ZMAT1Q5H9K5 638 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 FBXO47Q5MNV8 452 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 FAM102BQ5T8I3 360 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 STPG1Q5TH74 334 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 TRIM68Q6AZZ1 485 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 CTR9Q6PD62 1173 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 ARHGAP36Q6ZRI8 547 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 USP51Q70EK9 711 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 POLNQ7Z5Q5 900 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 FAM160B2Q86V87 743 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 COLGALT1Q8NBJ5 622 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 CHURC1Q8WUH1 139 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 FBXW5Q969U6 566 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 CEP95Q96GE4 821 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 EXOC2Q96KP1 924 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 MYL10Q9BUA6 226 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 FAM126AQ9BYI3 521 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms