RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 LARGE1O95461 756 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 JUNP05412 331 aaKnown RBP4.18□□□□□ -1.74
TDP1-217ENST00000557782 SDHBP21912 280 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 MAPK4P31152 587 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 ZEB1P37275 1124 aaPredicted RBP4.18□□□□□ -1.74
TDP1-217ENST00000557782 CHRNA4P43681 627 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 GATA4P43694 442 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 NLRP5P59047 1200 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 IFI35P80217 286 aaPredicted RBP4.18□□□□□ -1.74
TDP1-217ENST00000557782 LRMPQ12912 555 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 PRPF4BQ13523 1007 aaKnown RBP4.18□□□□□ -1.74
TDP1-217ENST00000557782 CAMK1Q14012 370 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 IQCB1Q15051 598 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 NFIL3Q16649 462 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 UTP14CQ5TAP6 766 aaKnown RBP4.18□□□□□ -1.74
TDP1-217ENST00000557782 LIPMQ5VYY2 423 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 KIAA1614Q5VZ46 1190 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 ZNF787Q6DD87 383 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 RPUSD3Q6P087 351 aaKnown RBP4.18□□□□□ -1.74
TDP1-217ENST00000557782 SLC23A3Q6PIS1 610 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 UBE3BQ7Z3V4 1068 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 SZRD1Q7Z422 152 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 GALNTL5Q7Z4T8 443 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 IQCA1Q86XH1 822 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 ZDHHC13Q8IUH4 622 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 SP8Q8IXZ3 490 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 NDUFAF2Q8N183 169 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 ZNF713Q8N859 430 aaPredicted RBP4.18□□□□□ -1.74
TDP1-217ENST00000557782 SLC17A8Q8NDX2 589 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 TOR1AIP2Q8NFQ8 470 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 OR5M3Q8NGP4 307 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 KCNG4Q8TDN1 519 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 ABHD5Q8WTS1 349 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 USP6NLQ92738 828 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 CDHR1Q96JP9 859 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 FMNL2Q96PY5 1086 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 MESP1Q9BRJ9 268 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 SLC46A2Q9BY10 475 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 MRPL9Q9BYD2 267 aaKnown RBP4.18□□□□□ -1.74
TDP1-217ENST00000557782 SIL1Q9H173 461 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 BARX1Q9HBU1 254 aaPredicted RBP4.18□□□□□ -1.74
TDP1-217ENST00000557782 LIN7CQ9NUP9 197 aaKnown RBP4.18□□□□□ -1.74
TDP1-217ENST00000557782 DNMT3BQ9UBC3 853 aaKnown RBP4.18□□□□□ -1.74
TDP1-217ENST00000557782 BAG5Q9UL15 447 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 FAM184BQ9ULE4 1060 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 SLC45A2Q9UMX9 530 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 ANGEL1Q9UNK9 670 aaKnown RBP4.18□□□□□ -1.74
TDP1-217ENST00000557782 USP15Q9Y4E8 981 aaPredicted RBP4.18□□□□□ -1.74
TDP1-217ENST00000557782 LYVE1Q9Y5Y7 322 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 CDY1Q9Y6F8 540 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 C2orf78A6NCI8 922 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 OR14I1A6ND48 311 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 FAM90A20PA6NIJ5 464 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 PTGES3LE9PB15 166 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 PEX12O00623 359 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 FYB1O15117 783 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 VILLO15195 856 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 PJA2O43164 708 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 RGS10O43665 173 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 RPP40O75818 363 aaKnown RBP4.17□□□□□ -1.74
TDP1-217ENST00000557782 MTA2O94776 668 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 SASH1O94885 1247 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 AGFG2O95081 481 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 KNG1P01042 644 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 PTMAP06454 111 aaKnown RBP4.17□□□□□ -1.74
TDP1-217ENST00000557782 ADRB2P07550 413 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 ATXN1LP0C7T5 689 aaKnown RBP4.17□□□□□ -1.74
TDP1-217ENST00000557782 VSIG10L2P0DP72 767 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 ARP10275 920 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 NR2F1P10589 423 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 UBL4AP11441 157 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 MUTP22033 750 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 LRPAP1P30533 357 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 SLC6A4P31645 630 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 GGT5P36269 586 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 ARL1P40616 181 aaPredicted RBP4.17□□□□□ -1.74
TDP1-217ENST00000557782 CASRP41180 1078 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 HARS2P49590 506 aaKnown RBP4.17□□□□□ -1.74
TDP1-217ENST00000557782 GZMKP49863 264 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 ITGA1P56199 1179 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 RPS3AP61247 264 aaKnown RBP4.17□□□□□ -1.74
TDP1-217ENST00000557782 TBL3Q12788 808 aaKnown RBP4.17□□□□□ -1.74
TDP1-217ENST00000557782 TCF15Q12870 199 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 SF3A3Q12874 501 aaKnown RBP eCLIP4.17□□□□□ -1.74
TDP1-217ENST00000557782 STK4Q13043 487 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 DUSP8Q13202 625 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 PDCLQ13371 301 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 TOP3AQ13472 1001 aaPredicted RBP4.17□□□□□ -1.74
TDP1-217ENST00000557782 SCARB2Q14108 478 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 TMEM266Q2M3C6 531 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 GALNTL6Q49A17 601 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 MFSD14BQ5SR56 506 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 MANEALQ5VSG8 457 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 FYB2Q5VWT5 728 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 ABLIM2Q6H8Q1 611 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 INO80CQ6PI98 192 aaPredicted RBP4.17□□□□□ -1.74
TDP1-217ENST00000557782 SLC22A25Q6T423 547 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 CYP20A1Q6UW02 462 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 LAYNQ6UX15 382 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 FRMD5Q7Z6J6 570 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms