RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 SLC5A3P53794 718 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 JAM2P57087 298 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 POLR2FP61218 127 aaKnown RBP14.45□□□□□ -0.1
SHMT2-234ENST00000557703 CCDC142Q17RM4 750 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 SLC5A9Q2M3M2 681 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 RAB41Q5JT25 222 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 GET4Q7L5D6 327 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-234ENST00000557703 CCDC186Q7Z3E2 898 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 CACNA2D4Q7Z3S7 1137 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 TADA2BQ86TJ2 420 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 MON1AQ86VX9 555 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 NPAS3Q8IXF0 933 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 ZMIZ2Q8NF64 920 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 ZNF397Q8NF99 534 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-234ENST00000557703 SHKBP1Q8TBC3 707 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 SLC35F5Q8WV83 523 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 SMARCD2Q92925 531 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 NOX5Q96PH1 765 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 MIS12Q9H081 205 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 KIF9Q9HAQ2 790 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 TLR8Q9NR97 1041 aaKnown RBP14.45□□□□□ -0.1
SHMT2-234ENST00000557703 TMEM51Q9NW97 253 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 MAGED2Q9UNF1 606 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-234ENST00000557703 GREB1Q4ZG55 1949 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 A0A1W2PQJ5 194 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 A0A1W2PRU2 124 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 C2CD4DB7Z1M9 353 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 HHLA1C9JL84 531 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 TEX33O43247 280 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 MOSPD3O75425 235 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 ECI2O75521 394 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 FBXO21O94952 628 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 ZDHHC11BP0C7U3 371 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 CLCN1P35523 988 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 SOX5P35711 763 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 RPL34P49207 117 aaKnown RBP14.44□□□□□ -0.1
SHMT2-234ENST00000557703 NTHL1P78549 312 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 ORC1Q13415 861 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 ZNF268Q14587 947 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-234ENST00000557703 GOLGA7BQ2TAP0 167 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 PM20D1Q6GTS8 502 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 PPP1R2P3Q6NXS1 205 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 GJB7Q6PEY0 223 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 SARM1Q6SZW1 724 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 HS6ST3Q8IZP7 471 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 ITFG1Q8TB96 612 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 TFAP2BQ92481 460 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 ASB16Q96NS5 453 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 NAP1L5Q96NT1 182 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-234ENST00000557703 MYADMQ96S97 322 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 TRIM62Q9BVG3 475 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 ZFP14Q9HCL3 533 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 ZNF334Q9HCZ1 680 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-234ENST00000557703 CNGB3Q9NQW8 809 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 TMEM30AQ9NV96 361 aa14.44□□□□□ -0.1
SHMT2-234ENST00000557703 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.44□□□□□ -0.1
SHMT2-234ENST00000557703 ITIH6Q6UXX5 1313 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 VCANP13611 3396 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 ZNF840PA6NDX5 716 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 CYP26A1O43174 497 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 THAP12O43422 761 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 BEST1O76090 585 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 LSM8O95777 96 aaKnown RBP14.43□□□□□ -0.1
SHMT2-234ENST00000557703 CYP11B1P15538 503 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 TCF3P15923 654 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 FERP16591 822 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 SSTR3P32745 418 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-234ENST00000557703 AVPR1AP37288 418 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 PBX1P40424 430 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 CCR2P41597 374 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 GPD2P43304 727 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 GPR15P49685 360 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 CACNA2D1P54289 1103 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 PDE4CQ08493 712 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 TAF10Q12962 218 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 TRIM14Q14142 442 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 KLHDC10Q6PID8 442 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 TMEM150AQ86TG1 271 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 PIGZQ86VD9 579 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 TTC30AQ86WT1 665 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 UBALD2Q8IYN6 164 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 CMTM8Q8IZV2 173 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 GPR152Q8TDT2 470 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 DEPDC1BQ8WUY9 529 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 IRGQQ8WZA9 623 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 SYN2Q92777 582 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-234ENST00000557703 FBXO32Q969P5 355 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 ELSPBP1Q96BH3 223 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 TCEAL4Q96EI5 215 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 SLITRK6Q9H5Y7 841 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 LRRC4Q9HBW1 653 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 CLIC5Q9NZA1 410 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 ZNF638Q14966 1978 aaKnown RBP14.43□□□□□ -0.1
SHMT2-234ENST00000557703 TCF20Q9UGU0 1960 aaKnown RBP14.43□□□□□ -0.1
SHMT2-234ENST00000557703 MYO10Q9HD67 2058 aa14.43□□□□□ -0.1
SHMT2-234ENST00000557703 M0QYV0 167 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 USP17L7P0C7H9 530 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 ALADP13716 330 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 CEBPBP17676 345 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 BRD2P25440 801 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms