RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 KIF26AQ9ULI4 1882 aaPredicted RBP13.23□□□□□ -0.29
SLIRP-211ENST00000557623 GTPBP10A4D1E9 387 aaKnown RBP13.23□□□□□ -0.29
SLIRP-211ENST00000557623 HEPACAM2A8MVW5 462 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 TK2O00142 265 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 YWHAQP27348 245 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 ADORA2BP29275 332 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 AVPR1AP37288 418 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 CACNA2D1P54289 1103 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 MAP3K7CLP57077 242 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 GPC5P78333 572 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 GCNT1Q02742 428 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 VITQ6UXI7 678 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 HFE2Q6ZVN8 426 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 SPNS2Q8IVW8 549 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 MFSD6LQ8IWD5 586 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 SUGP1Q8IWZ8 645 aaKnown RBP13.23□□□□□ -0.29
SLIRP-211ENST00000557623 YAF2Q8IY57 180 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 CMTM8Q8IZV2 173 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 MAB21L3Q8N8X9 362 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 SLC4A11Q8NBS3 891 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 PDZD8Q8NEN9 1154 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 OVCA2Q8WZ82 227 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 KCNK16Q96T55 309 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 SLC46A2Q9BY10 475 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 PLA2G2FQ9BZM2 168 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 INTS2Q9H0H0 1204 aaKnown RBP13.23□□□□□ -0.29
SLIRP-211ENST00000557623 MFSD1Q9H3U5 465 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 KIF9Q9HAQ2 790 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 PNPLA8Q9NP80 782 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 TMEM30AQ9NV96 361 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 GCNT4Q9P109 453 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 KIAA1257Q9ULG3 409 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 KMT2EQ8IZD2 1858 aa13.23□□□□□ -0.29
SLIRP-211ENST00000557623 MIA3Q5JRA6 1907 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 TRAV19A0A0A6YYK7 116 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 TADA3O75528 432 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 USP17L7P0C7H9 530 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 EEF1GP26641 437 aaKnown RBP13.22□□□□□ -0.29
SLIRP-211ENST00000557623 VIPR2P41587 438 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 SLC5A3P53794 718 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 SLC8A3P57103 927 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 USP46P62068 366 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 PPP1R26Q5T8A7 1209 aaPredicted RBP13.22□□□□□ -0.29
SLIRP-211ENST00000557623 ARHGAP17Q68EM7 881 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 TXNDC8Q6A555 127 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 ADGRD1Q6QNK2 874 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 GBP6Q6ZN66 633 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 CLEC20AQ6ZU45 233 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 ENOSF1Q7L5Y1 443 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 SIX5Q8N196 739 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 FBXL6Q8N531 539 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 CELF5Q8N6W0 485 aaKnown RBP13.22□□□□□ -0.29
SLIRP-211ENST00000557623 DNASE1L2Q92874 299 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 IRF7Q92985 503 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 JAKMIP2Q96AA8 810 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 SHDQ96IW2 340 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 SMOQ99835 787 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 FBXO44Q9H4M3 255 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 BRD9Q9H8M2 597 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 TRPC7Q9HCX4 862 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 PLSCR2Q9NRY7 297 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 TMEM63CQ9P1W3 806 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 CA14Q9ULX7 337 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 NFE2L3Q9Y4A8 694 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 PCDHB4Q9Y5E5 795 aa13.22□□□□□ -0.29
SLIRP-211ENST00000557623 NCANO14594 1321 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 KCNJ18B7U540 433 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 TNFRSF10BO14763 440 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 ZNF263O14978 683 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 CHADO15335 359 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 TPM2P07951 284 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 PAEPP09466 180 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 VDRP11473 427 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 NPR3P17342 541 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 RFX1P22670 979 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 GDI1P31150 447 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 IFRD2Q12894 506 aaPredicted RBP13.21□□□□□ -0.29
SLIRP-211ENST00000557623 TAF10Q12962 218 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 GRM2Q14416 872 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 KCNJ12Q14500 433 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 ZNF268Q14587 947 aaPredicted RBP13.21□□□□□ -0.29
SLIRP-211ENST00000557623 EXOC3L4Q17RC7 722 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 VWA3BQ502W6 1294 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 SGO2Q562F6 1265 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 SMYD5Q6GMV2 418 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 TMEM270Q6UE05 265 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 RRAGAQ7L523 313 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 UBR7Q8N806 425 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 ZMIZ2Q8NF64 920 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 BPIFB1Q8TDL5 484 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 FBXO32Q969P5 355 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 TUBGCP2Q9BSJ2 902 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 DUSP16Q9BY84 665 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 NAT10Q9H0A0 1025 aaKnown RBP13.21□□□□□ -0.29
SLIRP-211ENST00000557623 NDST4Q9H3R1 872 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 TRPV5Q9NQA5 729 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 ARHGEF3Q9NR81 526 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 TDP1Q9NUW8 608 aa13.21□□□□□ -0.29
SLIRP-211ENST00000557623 THG1LQ9NWX6 298 aaKnown RBP13.21□□□□□ -0.29
SLIRP-211ENST00000557623 IL37Q9NZH6 218 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms