RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 PTP4A2Q12974 167 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 ZNF268Q14587 947 aaPredicted RBP11.88□□□□□ -0.51
FOXN3-212ENST00000556541 VEPH1Q14D04 833 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 TCEAL1Q15170 157 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 CTC1Q2NKJ3 1217 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 TAF3Q5VWG9 929 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 ALKBH5Q6P6C2 394 aaKnown RBP11.88□□□□□ -0.51
FOXN3-212ENST00000556541 ZNF662Q6ZS27 426 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 MON1BQ7L1V2 547 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 ADGRD2Q7Z7M1 963 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 PIGZQ86VD9 579 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 NUP93Q8N1F7 819 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 IPO4Q8TEX9 1081 aaKnown RBP11.88□□□□□ -0.51
FOXN3-212ENST00000556541 PSMG2Q969U7 264 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 LRCH3Q96II8 777 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 CALR3Q96L12 384 aaKnown RBP11.88□□□□□ -0.51
FOXN3-212ENST00000556541 PGLYRP2Q96PD5 576 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 GAS2L1Q99501 681 aaPredicted RBP11.88□□□□□ -0.51
FOXN3-212ENST00000556541 TRIM62Q9BVG3 475 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 PRDM12Q9H4Q4 367 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 CYP4F11Q9HBI6 524 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 UXTQ9UBK9 157 aaPredicted RBP11.88□□□□□ -0.51
FOXN3-212ENST00000556541 PRRC2BQ5JSZ5 2229 aaKnown RBP11.88□□□□□ -0.51
FOXN3-212ENST00000556541 ANAPC1Q9H1A4 1944 aa11.88□□□□□ -0.51
FOXN3-212ENST00000556541 ANKRD62A6NC57 917 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 RFXAPO00287 272 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 BEST1O76090 585 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 IPO7O95373 1038 aaKnown RBP11.87□□□□□ -0.51
FOXN3-212ENST00000556541 FGF19O95750 216 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 PTMAP06454 111 aaKnown RBP11.87□□□□□ -0.51
FOXN3-212ENST00000556541 C8AP07357 584 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 CFHP08603 1231 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 PFKLP17858 780 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 ATF6P18850 670 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 NRIP1P48552 1158 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 PSEN1P49768 467 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 CACNA2D1P54289 1103 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 EPHB3P54753 998 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 MAP3K7CLP57077 242 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 KRT83P78385 493 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 HYAL1Q12794 435 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 ADGRE1Q14246 886 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 MGAT5BQ3V5L5 792 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 PTPN20Q4JDL3 420 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 SNX30Q5VWJ9 437 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 NAA35Q5VZE5 725 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 PMF1Q6P1K2 205 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 DENND5BQ6ZUT9 1274 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 ERICH1Q86X53 443 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 PALB2Q86YC2 1186 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 MCOLN2Q8IZK6 566 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 TTC9BQ8N6N2 239 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 PDZD8Q8NEN9 1154 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 UBA3Q8TBC4 463 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 C18orf8Q96DM3 657 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 MCRS1Q96EZ8 462 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 PPP1R13BQ96KQ4 1090 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 CPXM1Q96SM3 734 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 SFXN1Q9H9B4 322 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 MAN1C1Q9NR34 630 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 CYTH4Q9UIA0 394 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 ZMYM5Q9UJ78 669 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 SCML2Q9UQR0 700 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 PCDHGC5Q9Y5F6 944 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 DENND4AQ7Z401 1863 aa11.87□□□□□ -0.51
FOXN3-212ENST00000556541 NOTCH4Q99466 2003 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 TCRBV5S1A1TA0A578 114 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 SOWAHDA6NJG2 315 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 BTNL10A8MVZ5 291 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 XYLBO75191 536 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 CALCAP01258 141 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 LRG1P02750 347 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 EPCAMP16422 314 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 CA8P35219 290 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 SLC5A3P53794 718 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 ADAM15Q13444 863 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 SPA17Q15506 151 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 TCEAL5Q5H9L2 206 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 PPM1LQ5SGD2 360 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 RAD9BQ6WBX8 426 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 SCN4BQ8IWT1 228 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 ELMOD1Q8N336 334 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 ARHGAP18Q8N392 663 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 C3orf20Q8ND61 904 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 SLC7A14Q8TBB6 771 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 UBE2Q2Q8WVN8 375 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 KCNK16Q96T55 309 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 SEPT5Q99719 369 aaPredicted RBP11.86□□□□□ -0.51
FOXN3-212ENST00000556541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.86□□□□□ -0.51
FOXN3-212ENST00000556541 PRKD2Q9BZL6 878 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 LRRC4Q9HBW1 653 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 LCMT1Q9UIC8 334 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 C2orf16Q68DN1 1984 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 CLUHO75153 1309 aa11.86□□□□□ -0.51
FOXN3-212ENST00000556541 A0A0A6YYK5 440 aaPredicted RBP11.85□□□□□ -0.51
FOXN3-212ENST00000556541 SLC38A8A6NNN8 435 aa11.85□□□□□ -0.51
FOXN3-212ENST00000556541 E5RJQ4 531 aa11.85□□□□□ -0.51
FOXN3-212ENST00000556541 TULP2O00295 520 aa11.85□□□□□ -0.51
FOXN3-212ENST00000556541 ZNF263O14978 683 aa11.85□□□□□ -0.51
FOXN3-212ENST00000556541 PJA2O43164 708 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms