RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 E2F4Q16254 413 aa18.78■□□□□ 0.6
SDR39U1-219ENST00000556523 WDR72Q3MJ13 1102 aa18.78■□□□□ 0.6
SDR39U1-219ENST00000556523 N4BP2L1Q5TBK1 243 aaPredicted RBP18.78■□□□□ 0.6
SDR39U1-219ENST00000556523 TTC30AQ86WT1 665 aa18.78■□□□□ 0.6
SDR39U1-219ENST00000556523 XXYLT1Q8NBI6 393 aa18.78■□□□□ 0.6
SDR39U1-219ENST00000556523 MMP17Q9ULZ9 603 aa18.78■□□□□ 0.6
SDR39U1-219ENST00000556523 BCLAF3A2AJT9 711 aaKnown RBP18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 A8MXQ7 604 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 CLIC2O15247 247 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 PHACTR2O75167 634 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 PPP6R2O75170 966 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 ALDH1A2O94788 518 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 ADH1CP00326 375 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 APODP05090 189 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 FAM163BP0C2L3 166 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 MBL2P11226 248 aaPredicted RBP18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 PTPN1P18031 435 aaKnown RBP18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 PMLP29590 882 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 HOXD13P35453 343 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 SNRPFP62306 86 aaKnown RBP18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 TAF10Q12962 218 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 EPM2AIP1Q7L775 607 aaPredicted RBP18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 CYP2U1Q7Z449 544 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 CCDC33Q8N5R6 958 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 PDZD8Q8NEN9 1154 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 ZNF507Q8TCN5 953 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 SYAP1Q96A49 352 aaPredicted RBP18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 CNOT6LQ96LI5 555 aaKnown RBP18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 ZNF518BQ9C0D4 1074 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 MAGEF1Q9HAY2 307 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 CFAP97Q9P2B7 532 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 NXF1Q9UBU9 619 aaKnown RBP18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 INVSQ9Y283 1065 aa18.77■□□□□ 0.6
SDR39U1-219ENST00000556523 K7EQS6 105 aa18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 SCAMP3O14828 347 aaKnown RBP18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 TM4SF5O14894 197 aa18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 CUTAO60888 179 aa18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 RTN3O95197 1032 aaPredicted RBP18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 YEATS4O95619 227 aa18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 OLFM2O95897 454 aa18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 OAS1P00973 400 aaKnown RBP18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 MRPS21P82921 87 aaKnown RBP18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 ZXDBP98169 803 aa18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 DHCR24Q15392 516 aa18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 PMS2CLQ68D20 193 aa18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 UNC13DQ70J99 1090 aa18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 B3GALNT2Q8NCR0 500 aa18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 FBXO32Q969P5 355 aa18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 LSM14BQ9BX40 385 aaKnown RBP18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 DPEP3Q9H4B8 488 aa18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 CIZ1Q9ULV3 898 aaPredicted RBP18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 KMT2BQ9UMN6 2715 aaPredicted RBP18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 NUP205Q92621 2012 aa18.76■□□□□ 0.59
SDR39U1-219ENST00000556523 THADAQ6YHU6 1953 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 KHNYNO15037 678 aaKnown RBP18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 TGFB1I1O43294 461 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 KCNK5O95279 499 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 CST3P01034 146 aaPredicted RBP18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 ADH5P11766 374 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 YWHAQP27348 245 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 ATICP31939 592 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 EIF2DP41214 584 aaKnown RBP18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 MYL6P60660 151 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 BIRC3Q13489 604 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 CRY1Q16526 586 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 GAB4Q2WGN9 574 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 HSF5Q4G112 596 aaPredicted RBP18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 DAB2IPQ5VWQ8 1189 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 PSAPL1Q6NUJ1 521 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 CNNM4Q6P4Q7 775 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 RASSF3Q86WH2 238 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 MDGA1Q8NFP4 955 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 SPACA7Q96KW9 195 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 PNKPQ96T60 521 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 C7orf25Q9BPX7 421 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 MED10Q9BTT4 135 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 RNF38Q9H0F5 515 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 TBC1D14Q9P2M4 693 aa18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 CGNQ9P2M7 1197 aaKnown RBP18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 TFIP11Q9UBB9 837 aaKnown RBP18.75■□□□□ 0.59
SDR39U1-219ENST00000556523 CLDN5O00501 218 aa18.74■□□□□ 0.59
SDR39U1-219ENST00000556523 EXOC3O60645 756 aa18.74■□□□□ 0.59
SDR39U1-219ENST00000556523 KLF8O95600 359 aaPredicted RBP18.74■□□□□ 0.59
SDR39U1-219ENST00000556523 STAU1O95793 577 aaKnown RBP18.74■□□□□ 0.59
SDR39U1-219ENST00000556523 DHPSP49366 369 aaPredicted RBP18.74■□□□□ 0.59
SDR39U1-219ENST00000556523 NOVA1P51513 510 aaKnown RBP18.74■□□□□ 0.59
SDR39U1-219ENST00000556523 CACNA2D1P54289 1103 aa18.74■□□□□ 0.59
SDR39U1-219ENST00000556523 KDSRQ06136 332 aa18.74■□□□□ 0.59
SDR39U1-219ENST00000556523 ZNF699Q32M78 642 aa18.74■□□□□ 0.59
SDR39U1-219ENST00000556523 NUP93Q8N1F7 819 aa18.74■□□□□ 0.59
SDR39U1-219ENST00000556523 SCFD1Q8WVM8 642 aa18.74■□□□□ 0.59
SDR39U1-219ENST00000556523 OVCA2Q8WZ82 227 aa18.74■□□□□ 0.59
SDR39U1-219ENST00000556523 POLMQ9NP87 494 aaPredicted RBP18.74■□□□□ 0.59
SDR39U1-219ENST00000556523 ARHGEF4Q9NR80 690 aa18.74■□□□□ 0.59
SDR39U1-219ENST00000556523 BCCIPQ9P287 314 aaKnown RBP eCLIP18.74■□□□□ 0.59
SDR39U1-219ENST00000556523 NME7Q9Y5B8 376 aa18.74■□□□□ 0.59
SDR39U1-219ENST00000556523 ABCA7Q8IZY2 2146 aa18.74■□□□□ 0.59
SDR39U1-219ENST00000556523 LNP1A1A4G5 178 aa18.73■□□□□ 0.59
SDR39U1-219ENST00000556523 C4orf47A7E2U8 309 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms