RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 PDE1CQ14123 709 aaPredicted RBP5.33□□□□□ -1.56
TMEM260-210ENST00000556422 OASLQ15646 514 aaKnown RBP5.33□□□□□ -1.56
TMEM260-210ENST00000556422 SEZ6Q53EL9 994 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 KIAA1614Q5VZ46 1190 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 CFAP161Q6P656 301 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 CCDC25Q86WR0 208 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 ZNF354CQ86Y25 554 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 SLC7A3Q8WY07 619 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 MOGAT1Q96PD6 335 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 GPR20Q99678 358 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 ZNF624Q9P2J8 865 aaPredicted RBP5.33□□□□□ -1.56
TMEM260-210ENST00000556422 AMACRQ9UHK6 382 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 EIF2B4Q9UI10 523 aaKnown RBP5.33□□□□□ -1.56
TMEM260-210ENST00000556422 AMFRQ9UKV5 643 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 ZNF148Q9UQR1 794 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 TIMM22Q9Y584 194 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 SLC4A7Q9Y6M7 1214 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 CITO14578 2027 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 IGKV6-21A0A0C4DH24 114 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 CXCL11O14625 94 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 MAP3K7O43318 606 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 ADCY3O60266 1144 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 LILRB3O75022 631 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 TMCC2O75069 709 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 ZC3H11AO75152 810 aaKnown RBP eCLIP5.32□□□□□ -1.56
TMEM260-210ENST00000556422 BAIAP3O94812 1187 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 FGGP02679 453 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 S100A6P06703 90 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 CFHP08603 1231 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 C6orf222P0C671 652 aaPredicted RBP5.32□□□□□ -1.56
TMEM260-210ENST00000556422 COL6A1P12109 1028 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 PRKACAP17612 351 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 EVI2BP34910 448 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 HSD17B2P37059 387 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 TNFSF9P41273 254 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 NUBP1P53384 320 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 GPC5P78333 572 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 ZNF211Q13398 564 aaPredicted RBP5.32□□□□□ -1.56
TMEM260-210ENST00000556422 SNCBQ16143 134 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 CCDC62Q6P9F0 684 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 STK32CQ86UX6 486 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 SLC15A3Q8IY34 581 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 OR5B17Q8NGF7 314 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 PIP4K2CQ8TBX8 421 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 KAT2BQ92831 832 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 ARL8AQ96BM9 186 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 L3MBTL3Q96JM7 780 aaPredicted RBP5.32□□□□□ -1.56
TMEM260-210ENST00000556422 BTBD6Q96KE9 485 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 COG8Q96MW5 612 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 CELF4Q9BZC1 486 aaKnown RBP5.32□□□□□ -1.56
TMEM260-210ENST00000556422 FAM204AQ9H8W3 233 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 ARNT2Q9HBZ2 717 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 DDX18Q9NVP1 670 aaKnown RBP5.32□□□□□ -1.56
TMEM260-210ENST00000556422 LUZP4Q9P127 313 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 RASAL2Q9UJF2 1139 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 NOSIPQ9Y314 301 aaKnown RBP5.32□□□□□ -1.56
TMEM260-210ENST00000556422 UMODL1Q5DID0 1318 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 KAT6AQ92794 2004 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 H0YCG3 227 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 K7ERI5 159 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 STK25O00506 426 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 KRIT1O00522 736 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 LGR5O75473 907 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 NPPAP01160 153 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 HLA-DRAP01903 254 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 ALAS2P22557 587 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 SOX11P35716 441 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 SEPHS1P49903 392 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 TNNC1P63316 161 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 PPIL2Q13356 520 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 NNTQ13423 1086 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 ALFQ53S48 1182 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 FBXO16Q8IX29 292 aaPredicted RBP5.32□□□□□ -1.56
TMEM260-210ENST00000556422 FAM20CQ8IXL6 584 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 IFT20Q8IY31 132 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 IQCKQ8N0W5 287 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 MREGQ8N565 214 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 SPERTQ8NA61 448 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 MAIP1Q8WWC4 291 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 PRPF31Q8WWY3 499 aaKnown RBP5.32□□□□□ -1.56
TMEM260-210ENST00000556422 MAML1Q92585 1016 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 COPS5Q92905 334 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 SNX27Q96L92 541 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 RUNDC3BQ96NL0 473 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 ZIM3Q96PE6 472 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 PRPF18Q99633 342 aaKnown RBP5.32□□□□□ -1.56
TMEM260-210ENST00000556422 FAM129AQ9BZQ8 928 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 ADNPQ9H2P0 1102 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 TMEM134Q9H6X4 195 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 ZWILCHQ9H900 591 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 STARD7Q9NQZ5 370 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.32□□□□□ -1.56
TMEM260-210ENST00000556422 RBAKQ9NYW8 714 aaPredicted RBP5.32□□□□□ -1.56
TMEM260-210ENST00000556422 ANKFY1Q9P2R3 1169 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 TMEM5Q9Y2B1 443 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 USH1CQ9Y6N9 552 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 CCDC188H7C350 402 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 COMTP21964 271 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 DNAJB1P25685 340 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 MARK3P27448 753 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms