RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 SIRT6Q8N6T7 355 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 ZNF398Q8TD17 642 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 ADAMTS18Q8TE60 1221 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 DIS3LQ8TF46 1054 aaKnown RBP5.02□□□□□ -1.61
SCFD1-217ENST00000555953 RSPRY1Q96DX4 576 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 HOOK2Q96ED9 719 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 NT5C1BQ96P26 610 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 FYTTD1Q96QD9 318 aaKnown RBP5.02□□□□□ -1.61
SCFD1-217ENST00000555953 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 MS4A7Q9GZW8 240 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-217ENST00000555953 EBF3Q9H4W6 596 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 GBA2Q9HCG7 927 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-217ENST00000555953 MTMR4Q9NYA4 1195 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 ZNF580Q9UK33 172 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 ANKRD6Q9Y2G4 727 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 FNDC1Q4ZHG4 1894 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-217ENST00000555953 LY6G6EA0A0G2JKS1 128 aa5.01□□□□□ -1.61
SCFD1-217ENST00000555953 IGSF3O75054 1194 aa5.01□□□□□ -1.61
SCFD1-217ENST00000555953 GCATO75600 419 aa5.01□□□□□ -1.61
SCFD1-217ENST00000555953 PRF1P14222 555 aa5.01□□□□□ -1.61
SCFD1-217ENST00000555953 HOXD9P28356 352 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-217ENST00000555953 GKP32189 559 aa5.01□□□□□ -1.61
SCFD1-217ENST00000555953 CCKBRP32239 447 aa5.01□□□□□ -1.61
SCFD1-217ENST00000555953 CTBP1Q13363 440 aa5.01□□□□□ -1.61
SCFD1-217ENST00000555953 RBMS2Q15434 407 aaKnown RBP5.01□□□□□ -1.61
SCFD1-217ENST00000555953 TRIM71Q2Q1W2 868 aaKnown RBP5.01□□□□□ -1.61
SCFD1-217ENST00000555953 KLHL22Q53GT1 634 aa5.01□□□□□ -1.61
SCFD1-217ENST00000555953 AWAT1Q58HT5 328 aa5.01□□□□□ -1.61
SCFD1-217ENST00000555953 PNISRQ8TF01 805 aaKnown RBP5.01□□□□□ -1.61
SCFD1-217ENST00000555953 KBTBD7Q8WVZ9 684 aa5.01□□□□□ -1.61
SCFD1-217ENST00000555953 RAPGEF4Q8WZA2 1011 aa5.01□□□□□ -1.61
SCFD1-217ENST00000555953 PPP2R3CQ969Q6 453 aa5.01□□□□□ -1.61
SCFD1-217ENST00000555953 AASDHPPTQ9NRN7 309 aa5.01□□□□□ -1.61
SCFD1-217ENST00000555953 LPAR3Q9UBY5 353 aa5.01□□□□□ -1.61
SCFD1-217ENST00000555953 CACNA1IQ9P0X4 2223 aa5.01□□□□□ -1.61
SCFD1-217ENST00000555953 MYMKA6NI61 221 aa5□□□□□ -1.61
SCFD1-217ENST00000555953 TMEM233B4DJY2 109 aa5□□□□□ -1.61
SCFD1-217ENST00000555953 BTBD19C9JJ37 291 aa5□□□□□ -1.61
SCFD1-217ENST00000555953 BTN3A1O00481 513 aa5□□□□□ -1.61
SCFD1-217ENST00000555953 CES2O00748 559 aa5□□□□□ -1.61
SCFD1-217ENST00000555953 AP1G1O43747 822 aa5□□□□□ -1.61
SCFD1-217ENST00000555953 ABLIM3O94929 683 aa5□□□□□ -1.61
SCFD1-217ENST00000555953 NCLP19338 710 aaKnown RBP5□□□□□ -1.61
SCFD1-217ENST00000555953 HTR1BP28222 390 aa5□□□□□ -1.61
SCFD1-217ENST00000555953 TKTP29401 623 aaKnown RBP5□□□□□ -1.61
SCFD1-217ENST00000555953 CERCAMQ5T4B2 595 aa5□□□□□ -1.61
SCFD1-217ENST00000555953 C10orf25Q5T742 122 aa5□□□□□ -1.61
SCFD1-217ENST00000555953 ZNF783Q6ZMS7 281 aa5□□□□□ -1.61
SCFD1-217ENST00000555953 ZDHHC17Q8IUH5 632 aa5□□□□□ -1.61
SCFD1-217ENST00000555953 DENND1CQ8IV53 801 aa5□□□□□ -1.61
SCFD1-217ENST00000555953 GADD45GIP1Q8TAE8 222 aaPredicted RBP5□□□□□ -1.61
SCFD1-217ENST00000555953 VCPIP1Q96JH7 1222 aa5□□□□□ -1.61
SCFD1-217ENST00000555953 DPH1Q9BZG8 443 aa5□□□□□ -1.61
SCFD1-217ENST00000555953 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5□□□□□ -1.61
SCFD1-217ENST00000555953 GABBR1Q9UBS5 961 aa5□□□□□ -1.61
SCFD1-217ENST00000555953 H3BML4 177 aa4.99□□□□□ -1.61
SCFD1-217ENST00000555953 PMPCBO75439 489 aa4.99□□□□□ -1.61
SCFD1-217ENST00000555953 MT-CO3P00414 261 aa4.99□□□□□ -1.61
SCFD1-217ENST00000555953 HTRA4P83105 476 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-217ENST00000555953 GHRHRQ02643 423 aa4.99□□□□□ -1.61
SCFD1-217ENST00000555953 LMAN2Q12907 356 aa4.99□□□□□ -1.61
SCFD1-217ENST00000555953 MPP5Q8N3R9 675 aa4.99□□□□□ -1.61
SCFD1-217ENST00000555953 PPP1R35Q8TAP8 253 aa4.99□□□□□ -1.61
SCFD1-217ENST00000555953 OSR1Q8TAX0 266 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-217ENST00000555953 CUL5Q93034 780 aa4.99□□□□□ -1.61
SCFD1-217ENST00000555953 CCDC17Q96LX7 622 aa4.99□□□□□ -1.61
SCFD1-217ENST00000555953 ZMAT3Q9HA38 289 aaKnown RBP4.99□□□□□ -1.61
SCFD1-217ENST00000555953 DRG1Q9Y295 367 aaKnown RBP4.99□□□□□ -1.61
SCFD1-217ENST00000555953 H3BNC9 293 aa4.98□□□□□ -1.61
SCFD1-217ENST00000555953 PSMD9O00233 223 aa4.98□□□□□ -1.61
SCFD1-217ENST00000555953 UBXN7O94888 489 aa4.98□□□□□ -1.61
SCFD1-217ENST00000555953 KITP10721 976 aa4.98□□□□□ -1.61
SCFD1-217ENST00000555953 APEHP13798 732 aaKnown RBP4.98□□□□□ -1.61
SCFD1-217ENST00000555953 COPB1P53618 953 aaKnown RBP4.98□□□□□ -1.61
SCFD1-217ENST00000555953 BCAT1P54687 386 aa4.98□□□□□ -1.61
SCFD1-217ENST00000555953 SUMO2P61956 95 aaKnown RBP4.98□□□□□ -1.61
SCFD1-217ENST00000555953 CCNIQ14094 377 aa4.98□□□□□ -1.61
SCFD1-217ENST00000555953 SEC23BQ15437 767 aa4.98□□□□□ -1.61
SCFD1-217ENST00000555953 PTCHD4Q6ZW05 846 aa4.98□□□□□ -1.61
SCFD1-217ENST00000555953 DAAM2Q86T65 1068 aa4.98□□□□□ -1.61
SCFD1-217ENST00000555953 COL23A1Q86Y22 540 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-217ENST00000555953 OR6B3Q8NGW1 331 aa4.98□□□□□ -1.61
SCFD1-217ENST00000555953 DNAJB14Q8TBM8 379 aa4.98□□□□□ -1.61
SCFD1-217ENST00000555953 MAP4K1Q92918 833 aa4.98□□□□□ -1.61
SCFD1-217ENST00000555953 SIGLEC11Q96RL6 698 aa4.98□□□□□ -1.61
SCFD1-217ENST00000555953 BRIP1Q9BX63 1249 aa4.98□□□□□ -1.61
SCFD1-217ENST00000555953 SMURF2Q9HAU4 748 aa4.98□□□□□ -1.61
SCFD1-217ENST00000555953 A0A1W2PPL8 197 aa4.97□□□□□ -1.61
SCFD1-217ENST00000555953 TMEM191BP0C7N4 346 aa4.97□□□□□ -1.61
SCFD1-217ENST00000555953 DIO1P49895 249 aa4.97□□□□□ -1.61
SCFD1-217ENST00000555953 SLC13A2Q13183 592 aa4.97□□□□□ -1.61
SCFD1-217ENST00000555953 GPR162Q16538 588 aa4.97□□□□□ -1.61
SCFD1-217ENST00000555953 DCAF12L1Q5VU92 463 aa4.97□□□□□ -1.61
SCFD1-217ENST00000555953 PIP4P1Q86T03 277 aa4.97□□□□□ -1.61
SCFD1-217ENST00000555953 SPARTQ8N0X7 666 aa4.97□□□□□ -1.61
SCFD1-217ENST00000555953 LINC01465Q8N7H1 131 aa4.97□□□□□ -1.61
SCFD1-217ENST00000555953 NSMCE1Q8WV22 266 aa4.97□□□□□ -1.61
SCFD1-217ENST00000555953 MAML1Q92585 1016 aa4.97□□□□□ -1.61
SCFD1-217ENST00000555953 CTHRC1Q96CG8 243 aa4.97□□□□□ -1.61
SCFD1-217ENST00000555953 ADGRE3Q9BY15 652 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms