RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ZNF329Q86UD4 541 aa3.99□□□□□ -1.77
SRP54-207ENST00000555535 SOCS4Q8WXH5 440 aa3.99□□□□□ -1.77
SRP54-207ENST00000555535 ATP2A3Q93084 1043 aa3.99□□□□□ -1.77
SRP54-207ENST00000555535 TEKT5Q96M29 485 aa3.99□□□□□ -1.77
SRP54-207ENST00000555535 DPCDQ9BVM2 203 aaPredicted RBP3.99□□□□□ -1.77
SRP54-207ENST00000555535 TMEM8AQ9HCN3 771 aa3.99□□□□□ -1.77
SRP54-207ENST00000555535 SEMA4BQ9NPR2 832 aaPredicted RBP3.99□□□□□ -1.77
SRP54-207ENST00000555535 SSX2IPQ9Y2D8 614 aa3.99□□□□□ -1.77
SRP54-207ENST00000555535 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.99□□□□□ -1.77
SRP54-207ENST00000555535 XPOTO43592 962 aaKnown RBP3.98□□□□□ -1.77
SRP54-207ENST00000555535 CAMTA2O94983 1202 aa3.98□□□□□ -1.77
SRP54-207ENST00000555535 SYF2O95926 243 aaKnown RBP3.98□□□□□ -1.77
SRP54-207ENST00000555535 SMARCA1P28370 1054 aa3.98□□□□□ -1.77
SRP54-207ENST00000555535 PXNP49023 591 aaPredicted RBP3.98□□□□□ -1.77
SRP54-207ENST00000555535 GAS1P54826 345 aa3.98□□□□□ -1.77
SRP54-207ENST00000555535 RPL36AP83881 106 aaKnown RBP3.98□□□□□ -1.77
SRP54-207ENST00000555535 HSF1Q00613 529 aa3.98□□□□□ -1.77
SRP54-207ENST00000555535 BOP1Q14137 746 aaKnown RBP3.98□□□□□ -1.77
SRP54-207ENST00000555535 E2F2Q14209 437 aa3.98□□□□□ -1.77
SRP54-207ENST00000555535 KIF22Q14807 665 aa3.98□□□□□ -1.77
SRP54-207ENST00000555535 SLC9C1Q4G0N8 1177 aa3.98□□□□□ -1.77
SRP54-207ENST00000555535 MANEAQ5SRI9 462 aa3.98□□□□□ -1.77
SRP54-207ENST00000555535 TMTC4Q5T4D3 741 aa3.98□□□□□ -1.77
SRP54-207ENST00000555535 SLC4A10Q6U841 1118 aa3.98□□□□□ -1.77
SRP54-207ENST00000555535 USP37Q86T82 979 aa3.98□□□□□ -1.77
SRP54-207ENST00000555535 NTPCRQ9BSD7 190 aaKnown RBP3.98□□□□□ -1.77
SRP54-207ENST00000555535 C1orf43Q9BWL3 253 aa3.98□□□□□ -1.77
SRP54-207ENST00000555535 CCDC8Q9H0W5 538 aaPredicted RBP3.98□□□□□ -1.77
SRP54-207ENST00000555535 ERC2O15083 957 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 MT-CO3P00414 261 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 MYBL2P10244 700 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 TNFRSF8P28908 595 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 PIK3CGP48736 1102 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 NFATC4Q14934 902 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 ODF1Q14990 250 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 RNASE12Q5GAN4 147 aaKnown RBP3.97□□□□□ -1.77
SRP54-207ENST00000555535 ARHGAP40Q5TG30 622 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 SYDE2Q5VT97 1194 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 NECAB2Q7Z6G3 386 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 FAM90A1Q86YD7 464 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 WFIKKN2Q8TEU8 576 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 ARHGAP39Q9C0H5 1083 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 SLAMF7Q9NQ25 335 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 ASIC5Q9NY37 505 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 TRHDEQ9UKU6 1024 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 ZDHHC8Q9ULC8 765 aa3.97□□□□□ -1.77
SRP54-207ENST00000555535 CFAP20Q9Y6A4 193 aaKnown RBP3.97□□□□□ -1.77
SRP54-207ENST00000555535 PRDX5P30044 214 aa3.96□□□□□ -1.78
SRP54-207ENST00000555535 IL6STP40189 918 aaPredicted RBP3.96□□□□□ -1.78
SRP54-207ENST00000555535 FXR1P51114 621 aaKnown RBP eCLIP3.96□□□□□ -1.78
SRP54-207ENST00000555535 SATB1Q01826 763 aa3.96□□□□□ -1.78
SRP54-207ENST00000555535 SP2Q02086 613 aa3.96□□□□□ -1.78
SRP54-207ENST00000555535 MTMR1Q13613 665 aa3.96□□□□□ -1.78
SRP54-207ENST00000555535 KEAP1Q14145 624 aa3.96□□□□□ -1.78
SRP54-207ENST00000555535 ZNF750Q32MQ0 723 aa3.96□□□□□ -1.78
SRP54-207ENST00000555535 UAP1L1Q3KQV9 507 aa3.96□□□□□ -1.78
SRP54-207ENST00000555535 LONRF3Q496Y0 759 aa3.96□□□□□ -1.78
SRP54-207ENST00000555535 NPNTQ6UXI9 565 aa3.96□□□□□ -1.78
SRP54-207ENST00000555535 TTC7BQ86TV6 843 aa3.96□□□□□ -1.78
SRP54-207ENST00000555535 IQCF1Q8N6M8 205 aa3.96□□□□□ -1.78
SRP54-207ENST00000555535 SIRT6Q8N6T7 355 aa3.96□□□□□ -1.78
SRP54-207ENST00000555535 MOGAT1Q96PD6 335 aa3.96□□□□□ -1.78
SRP54-207ENST00000555535 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
SRP54-207ENST00000555535 DNMT3BQ9UBC3 853 aaKnown RBP3.96□□□□□ -1.78
SRP54-207ENST00000555535 AMFRQ9UKV5 643 aa3.96□□□□□ -1.78
SRP54-207ENST00000555535 GABRDO14764 452 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 SPTLC2O15270 562 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 GRID2O43424 1007 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 ARIH2O95376 493 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 FPR3P25089 353 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 B4GALNT1Q00973 533 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 EGFLAMQ63HQ2 1017 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 HIST2H2BCQ6DN03 193 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 RGS7BPQ6MZT1 257 aaPredicted RBP3.95□□□□□ -1.78
SRP54-207ENST00000555535 SPATA2LQ8IUW3 424 aaPredicted RBP3.95□□□□□ -1.78
SRP54-207ENST00000555535 NUDCD2Q8WVJ2 157 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 SLC25A28Q96A46 364 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 MED30Q96HR3 178 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 SLC46A1Q96NT5 459 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 CD93Q9NPY3 652 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 USP35Q9P2H5 1018 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 HESX1Q9UBX0 185 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 ICAM5Q9UMF0 924 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 ATP8A1Q9Y2Q0 1164 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 PRKAB1Q9Y478 270 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 PCDHA3Q9Y5H8 950 aa3.95□□□□□ -1.78
SRP54-207ENST00000555535 M0QYG6 137 aa3.94□□□□□ -1.78
SRP54-207ENST00000555535 ZRANB2O95218 330 aaKnown RBP eCLIP3.94□□□□□ -1.78
SRP54-207ENST00000555535 PLGP00747 810 aaPredicted RBP3.94□□□□□ -1.78
SRP54-207ENST00000555535 PLA2G2AP14555 144 aa3.94□□□□□ -1.78
SRP54-207ENST00000555535 TBXAS1P24557 533 aaPredicted RBP3.94□□□□□ -1.78
SRP54-207ENST00000555535 PDE6CP51160 858 aa3.94□□□□□ -1.78
SRP54-207ENST00000555535 RRP1P56182 461 aaKnown RBP3.94□□□□□ -1.78
SRP54-207ENST00000555535 KRT85P78386 507 aa3.94□□□□□ -1.78
SRP54-207ENST00000555535 DDR1Q08345 913 aa3.94□□□□□ -1.78
SRP54-207ENST00000555535 IQCB1Q15051 598 aa3.94□□□□□ -1.78
SRP54-207ENST00000555535 DENND2CQ68D51 928 aa3.94□□□□□ -1.78
SRP54-207ENST00000555535 TMEM65Q6PI78 240 aa3.94□□□□□ -1.78
SRP54-207ENST00000555535 B4GALNT4Q76KP1 1039 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms