RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ANKRD22Q5VYY1 191 aa25.42■■□□□ 1.66
TMEM260-207ENST00000555497 SESTD1Q86VW0 696 aa25.42■■□□□ 1.66
TMEM260-207ENST00000555497 C10orf67Q8IYJ2 551 aa25.42■■□□□ 1.66
TMEM260-207ENST00000555497 ZNF317Q96PQ6 595 aaPredicted RBP25.42■■□□□ 1.66
TMEM260-207ENST00000555497 DDX20Q9UHI6 824 aaKnown RBP25.42■■□□□ 1.66
TMEM260-207ENST00000555497 FARP1Q9Y4F1 1045 aaPredicted RBP25.42■■□□□ 1.66
TMEM260-207ENST00000555497 A8MXQ7 604 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 APOC4-APOC2K7ER74 178 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 APOC2P02655 101 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 RPL22P35268 128 aaKnown RBP25.41■■□□□ 1.66
TMEM260-207ENST00000555497 NRLP54845 237 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 VSTM1Q6UX27 236 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 ARRDC4Q8NCT1 418 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 FRMD8P1Q9BZ68 369 aaPredicted RBP25.41■■□□□ 1.66
TMEM260-207ENST00000555497 INTS9Q9NV88 658 aaKnown RBP25.41■■□□□ 1.66
TMEM260-207ENST00000555497 GPATCH2LQ9NWQ4 482 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 NAALADL1Q9UQQ1 740 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 CENPFP49454 3210 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 C5orf60A6NFR6 353 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 GOLGA8MH3BSY2 632 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 BANF1O75531 89 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 CPT1AP50416 773 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 ZNF157P51786 506 aaPredicted RBP25.41■■□□□ 1.66
TMEM260-207ENST00000555497 EIF3EP60228 445 aaKnown RBP25.41■■□□□ 1.66
TMEM260-207ENST00000555497 SLC6A3Q01959 620 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 DPYSL3Q14195 570 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 FBXO47Q5MNV8 452 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 C17orf99Q6UX52 265 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 TAOK1Q7L7X3 1001 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 UNC93AQ86WB7 457 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 TAB3Q8N5C8 712 aaPredicted RBP25.41■■□□□ 1.66
TMEM260-207ENST00000555497 C7orf31Q8N865 590 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 MIS12Q9H081 205 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 RSAD1Q9HA92 442 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 EURLQ9NYK6 297 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 TBK1Q9UHD2 729 aa25.41■■□□□ 1.66
TMEM260-207ENST00000555497 CCDC130P13994 396 aa25.4■■□□□ 1.66
TMEM260-207ENST00000555497 CTCFP49711 727 aaPredicted RBP25.4■■□□□ 1.66
TMEM260-207ENST00000555497 XKR4Q5GH76 650 aa25.4■■□□□ 1.66
TMEM260-207ENST00000555497 FAM182AQ5T1J6 154 aa25.4■■□□□ 1.66
TMEM260-207ENST00000555497 ARHGAP17Q68EM7 881 aa25.4■■□□□ 1.66
TMEM260-207ENST00000555497 CLEC4CQ8WTT0 213 aa25.4■■□□□ 1.66
TMEM260-207ENST00000555497 CPT1BQ92523 772 aa25.4■■□□□ 1.66
TMEM260-207ENST00000555497 PRMT1Q99873 361 aaKnown RBP25.4■■□□□ 1.66
TMEM260-207ENST00000555497 AP5M1Q9H0R1 490 aa25.4■■□□□ 1.66
TMEM260-207ENST00000555497 LGALS13Q9UHV8 139 aa25.4■■□□□ 1.66
TMEM260-207ENST00000555497 SHOC2Q9UQ13 582 aa25.4■■□□□ 1.66
TMEM260-207ENST00000555497 DPYSL4O14531 572 aa25.4■■□□□ 1.66
TMEM260-207ENST00000555497 PRPSAP2O60256 369 aa25.4■■□□□ 1.66
TMEM260-207ENST00000555497 IGHA2P01877 340 aa25.4■■□□□ 1.66
TMEM260-207ENST00000555497 ABHD2P08910 425 aa25.4■■□□□ 1.66
TMEM260-207ENST00000555497 TFE3P19532 575 aaPredicted RBP25.4■■□□□ 1.66
TMEM260-207ENST00000555497 ZC3H12AQ5D1E8 599 aaKnown RBP25.4■■□□□ 1.66
TMEM260-207ENST00000555497 FAM71DQ8N9W8 422 aa25.4■■□□□ 1.66
TMEM260-207ENST00000555497 SMG8Q8ND04 991 aaKnown RBP25.4■■□□□ 1.66
TMEM260-207ENST00000555497 CHMP6Q96FZ7 201 aa25.4■■□□□ 1.66
TMEM260-207ENST00000555497 NGRNQ9NPE2 291 aaKnown RBP25.4■■□□□ 1.66
TMEM260-207ENST00000555497 HESX1Q9UBX0 185 aa25.4■■□□□ 1.66
TMEM260-207ENST00000555497 DNAH12Q6ZR08 3092 aa25.39■■□□□ 1.66
TMEM260-207ENST00000555497 KPNA7A9QM74 516 aa25.39■■□□□ 1.66
TMEM260-207ENST00000555497 SETSIPP0DME0 302 aa25.39■■□□□ 1.66
TMEM260-207ENST00000555497 IL4RP24394 825 aa25.39■■□□□ 1.66
TMEM260-207ENST00000555497 GCAP28676 217 aa25.39■■□□□ 1.66
TMEM260-207ENST00000555497 STAT4Q14765 748 aa25.39■■□□□ 1.66
TMEM260-207ENST00000555497 SCYL2Q6P3W7 929 aa25.39■■□□□ 1.66
TMEM260-207ENST00000555497 RSAD2Q8WXG1 361 aa25.39■■□□□ 1.66
TMEM260-207ENST00000555497 IPPQ9Y573 584 aa25.39■■□□□ 1.66
TMEM260-207ENST00000555497 C17orf102A2RUQ5 167 aa25.39■■□□□ 1.65
TMEM260-207ENST00000555497 ALOX15BO15296 676 aa25.39■■□□□ 1.65
TMEM260-207ENST00000555497 RBP3P10745 1247 aa25.39■■□□□ 1.65
TMEM260-207ENST00000555497 KCNE1P15382 129 aa25.39■■□□□ 1.65
TMEM260-207ENST00000555497 ADORA2BP29275 332 aa25.39■■□□□ 1.65
TMEM260-207ENST00000555497 MPP2Q14168 576 aa25.39■■□□□ 1.65
TMEM260-207ENST00000555497 C6orf89Q6UWU4 347 aa25.39■■□□□ 1.65
TMEM260-207ENST00000555497 CEP128Q6ZU80 1094 aa25.39■■□□□ 1.65
TMEM260-207ENST00000555497 SPATA18Q8TC71 538 aa25.39■■□□□ 1.65
TMEM260-207ENST00000555497 FAM172AQ8WUF8 416 aa25.39■■□□□ 1.65
TMEM260-207ENST00000555497 TCRBV7S3A2A0A539 114 aa25.38■■□□□ 1.65
TMEM260-207ENST00000555497 MYADML2A6NDP7 307 aa25.38■■□□□ 1.65
TMEM260-207ENST00000555497 CD4P01730 458 aa25.38■■□□□ 1.65
TMEM260-207ENST00000555497 GNL1P36915 607 aaPredicted RBP25.38■■□□□ 1.65
TMEM260-207ENST00000555497 CRYBB1P53674 252 aaPredicted RBP25.38■■□□□ 1.65
TMEM260-207ENST00000555497 CA9Q16790 459 aa25.38■■□□□ 1.65
TMEM260-207ENST00000555497 CCDC13Q8IYE1 715 aa25.38■■□□□ 1.65
TMEM260-207ENST00000555497 CRYBG2Q8N1P7 616 aa25.38■■□□□ 1.65
TMEM260-207ENST00000555497 NAT8LQ8N9F0 302 aa25.38■■□□□ 1.65
TMEM260-207ENST00000555497 ADAM33Q9BZ11 813 aa25.38■■□□□ 1.65
TMEM260-207ENST00000555497 TMEM120BA0PK00 339 aa25.37■■□□□ 1.65
TMEM260-207ENST00000555497 HOXC8P31273 242 aa25.37■■□□□ 1.65
TMEM260-207ENST00000555497 IFNAR2P48551 515 aa25.37■■□□□ 1.65
TMEM260-207ENST00000555497 PURAQ00577 322 aaKnown RBP25.37■■□□□ 1.65
TMEM260-207ENST00000555497 PDIA2Q13087 525 aaKnown RBP25.37■■□□□ 1.65
TMEM260-207ENST00000555497 FSCN1Q16658 493 aaKnown RBP25.37■■□□□ 1.65
TMEM260-207ENST00000555497 MSS51Q4VC12 460 aa25.37■■□□□ 1.65
TMEM260-207ENST00000555497 CAPN12Q6ZSI9 719 aa25.37■■□□□ 1.65
TMEM260-207ENST00000555497 ZBED8Q8IZ13 594 aa25.37■■□□□ 1.65
TMEM260-207ENST00000555497 STK32AQ8WU08 396 aa25.37■■□□□ 1.65
TMEM260-207ENST00000555497 SEC16BQ96JE7 1060 aa25.37■■□□□ 1.65
TMEM260-207ENST00000555497 RNF157Q96PX1 679 aa25.37■■□□□ 1.65
TMEM260-207ENST00000555497 GDAP2Q9NXN4 497 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms